Muricauda meishanensis sp. nov., a facultative anaerobic bacterium belonging to the family Flavobacteriaceae isolated from marine sediment in the East China Sea

生物 兼性 中国海 16S核糖体RNA 黄杆菌科 中国 沉积物 海洋噬菌体 细菌 海洋学 生态学 考古 拟杆菌 古生物学 地理 地质学
作者
Chaoling Sun,Chi Zhang,Chaobo Guo,Hong Ding,Dawoon Jung,Eun‐Young Seo,Yoshiteru Aoi,Shan He,Lijian Ding,Weiyan Zhang
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:73 (9) 被引量:1
标识
DOI:10.1099/ijsem.0.006059
摘要

A facultative anaerobic, Gram-strain-negative, rod-shaped bacterium (strain NBU2970 T ) was isolated by using modified ichip in situ cultivation from a marine sediment sample collected from Meishan Island in the East China Sea. Strain NBU2970 T grew optimally at 37 °C, with a NaCl concentration of 2.0 % (w/v) and at pH 7.0. The 16S rRNA gene sequence analyses revealed that strain NBU2970 T represents a novel species with the genus Muricauda , sharing highest sequence identities with Muricauda beolgyonensis BB-My12 T (96.1 %), Muricauda alvinocaridis SCR12 T (96.0 %), Muricauda taeanensis 105 T (96.0 %) and Muricauda ruestringensis B1 T (95.6 %). Phylogenetic analyses also indicated that strain NBU2970 T clustered with the genus Muricauda and was closely related to M. beolgyonensis BB-My12 T and M. ruestringensis B1 T . The draft genome sequence of strain NBU2970 T was composed of six contigs with a size of 3.2 Mbp, containing 3045 protein-coding genes and 38 RNA genes. The DNA G+C content was 43.8 mol%. The average nucleotide identity and digital DNA–DNA hybridization values between strain NBU2970 T and related species of the genus Muricauda were well below the threshold limit for prokaryotic species delineation. The major cellular fatty acids were iso-C 15 : 0 , iso-C 15 : 1 G and iso-C 17 : 0 3-OH. The only respiratory quinone was MK-6. The major polar lipid was phosphatidylethanolamine. Based on its phenotypic, chemotaxonomic and genotypic data, strain NBU2970 T is considered to be a representative of a novel species in the genus Muricauda , for which the name Muricauda meishanensis sp. nov. is proposed. The type strain is NBU2970 T (=KCTC 82915 T =MCCC 1K06394 T ).
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