METAGENOMIC ANALYSIS OF MICROBIAL CONSORTIUM GF-20 IN CORN STOVER DEGRADATION AT LOW TEMPERATURE

木聚糖酶 微生物 玉米秸秆 微生物联合体 蛋白质细菌 食品科学 生物 厚壁菌 基因组 生物化学 干草 假单胞菌 微生物种群生物学 黄杆菌 细菌 发酵 基因 生态学 作物 遗传学 16S核糖体RNA
作者
Bizhou Zhang,Qinggeer Borjigin,Julin Gao,Xiang Yu,Shuping Hu,Fu-gui Wang,Xin Zhang,Shengcai Han
出处
期刊:Journal of Environmental Engineering and Landscape Management [Vilnius Gediminas Technical University]
卷期号:31 (1): 92-102
标识
DOI:10.3846/jeelm.2023.18489
摘要

In our previous work, a microbial consortium GF-20 (Qinggeer et al., 2016) was enriched from compost habitats and adapted to efficiently and stably degrade corn stover under low temperatures. While the main microorganism and degradation-related functions and degradation-related coding enzyme genes of GF-20 were not clear. Therefore, the current study used the metagenomic to decipher the systematic and functional contexts within such microbial consortium under low temperatures. The results showed that the dominant functional microbials in GF-20 consortium were bacteria. The dominant phylums in GF-20 consortium were Proteobacteria (62.84%) and Bacteroidetes (10.24%). The dominant genus was Pseudomonas (50.84%), followed by Dysgonomonas (5.86%), Achromobacter (4.94%), Stenotrophomonas (3.67%) and Flavobacterium (2.04%). The metabolism was mainly composed of carbohydrate metabolism and amino acid metabolism, and included signal transduction, cell transport and other metabolic modes. The functional genes encoded were mainly distributed in glycosidolytic enzyme genes, and the functional enzymes were β-glucosidase, acetyl-CoA, pyruvate dehydrogenase and galactosidase. The GF-20 microbial consortium degraded the cellulose in corn stover primarily by β-glucosidase and endoglucanase, which were produced by 12 genera of microorganisms. The hemicellulose synergistic effect was produced by 15 genera of microorganisms including xylanase, xyloglucanase, mannolanase and branching enzyme.

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