Actinotalea soli sp. nov., isolated from Kubuqi Desert soil

拉伤 磷脂酰甘油 16S核糖体RNA 生物 基因组DNA 系统发育树 植物 DNA 基因 磷脂 解剖 遗传学 磷脂酰胆碱
作者
Jie Du,Weiwei Ping,Ya Chen,Huancheng Pang,Pengze Bai,Siqi Cui,Jianli Zhang
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:72 (12) 被引量:2
标识
DOI:10.1099/ijsem.0.005660
摘要

A Gram-stain positive, facultatively anaerobic, motile rod-shaped strain, BY-33T, was isolated from a soil sample obtained from the Kubuqi Desert, PR China. Phylogenetic analysis based on 16S rRNA gene sequence similarity revealed that strain BY-33T was most closely related to the genus Actinotalea, including Actinotalea ferrariae CF5-4T (98.2 % similarity), 'Actinotalea subterranea' HO-Ch2T (98.0 %), Actinotalea solisilvae THG-T121T (97.6 %), 'Actinotalea bogoriensis' 69B4T (97.5 %), Actinotalea fermentans MT (97.3 %) and 'Actinotalea carbonis' T26T (97.0 %). The strain grew at 0‒37 °C (optimum, 28-30 °C) and pH 6.0-11.0 (optimum, pH 9.0-10.0) and with 0‒8.0 % (w/v) NaCl (optimum, 3.0%) on tryptic soy agar. It had catalase activity, but no oxidase activity. The polar lipids of strain BY-33T contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, and phosphatidylinositol mannosides. The major respiratory quinone of strain BY-33T was MK-10 (H4). Its major fatty acids were anteiso-C15 : 0, anteiso-C15 : 1 A and C16 : 0. The genomic DNA G+C content of strain BY-33T was 73.0 mol% based on total genome calculations. The average nucleotide identity scores between the genomic sequences of strain BY-33T and the other species of the genus Actinotalea were found to be low (ANIm <85.0 %, ANIb <77.0 % and OrthoANIu <78.0 %). Furthermore, the digital DNA-DNA hybridization and average amino acid identity values between strain BY-33T and the closely related species ranged from 20.5 to 21.0% and from 62.2 to 72.2 %, respectively. Based on the results of phylogenetic, phenotypic, genotypic and chemotaxonomic analyses, it is concluded that strain BY-33T represents a novel species within the genus Actinotalea, for which the name Actinotalea soli sp. nov. is proposed. The type strain is BY-33T (=CGMCC 1.17460T=KCTC 49362T).
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