突变体
基础(拓扑)
突变
计算生物学
计算机科学
生物
基因
遗传学
数学
数学分析
作者
Mei Hong,Peng Wang,Tao Shangguan,G L Li,Rongrong Bian,Weifeng He,Wenting Jiang,Jieping Chen
出处
期刊:PubMed
[National Institutes of Health]
日期:2023-04-14
卷期号:44 (4): 308-315
标识
DOI:10.3760/cma.j.issn.0253-2727.2023.04.008
摘要
Objective: To determine whether the adenine base editor (ABE7.10) can be used to fix harmful mutations in the human G6PC3 gene. Methods: To investigate the safety of base-edited embryos, off-target analysis by deep sequencing was used to examine the feasibility and editing efficiency of various sgRNA expression vectors. The human HEK293T mutation models and human embryos were also used to test the feasibility and editing efficiency of correction. Results: ①The G6PC3(C295T) mutant cell model was successfully created. ②In the G6PC3(C295T) mutant cell model, three distinct Re-sgRNAs were created and corrected, with base correction efficiency ranging from 8.79% to 19.56% . ③ ABE7.10 could successfully fix mutant bases in the human pathogenic embryo test; however, base editing events had also happened in other locations. ④ With the exception of one noncoding site, which had a high safety rate, deep sequencing analysis revealed that the detection of 32 probable off-target sites was <0.5% . Conclusion: This study proposes a new base correction strategy based on human pathogenic embryos; however, it also produces a certain nontarget site editing, which needs to be further analyzed on the PAM site or editor window.
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