生物
16S核糖体RNA
根际
植物
拉伤
核糖体RNA
微生物学
系统发育树
二氨基酸
属
细菌
基因
遗传学
基因序列
解剖
作者
Peter Kämpfer,Stefanie P. Glaeser,John A. McInroy,Dominique Clermont,André Lipski,Alexis Criscuolo
标识
DOI:10.1099/ijsem.0.005636
摘要
A Gram-stain-positive, facultative anaerobic endospore-forming bacterium, which originated from roots/rhizosphere of maize ( Zea mays ), was investigated for its taxonomic position. On the basis of 16S rRNA gene sequence similarities, strain JJ-3 T was grouped together with Neobacillus species showing the highest similarities to Neobacillus bataviensis (98.8 %) and the three species Neobacillus dendrensis , Neobacillus soli and Neobacillus cucumis (all 98.6 %). The 16S rRNA gene sequence similarities to the sequences of the type strains of other Neobacillus species were lower than 98.5 %. The average nucleotide identity, average amino acid identity and digital DNA–DNA hybridization values between the JJ-3 T genome assembly and those of the other Neobacillus type strains were <83, <85 and <27 %, respectively. Chemotaxonomic features supported the grouping of the strain to the genus Neobacillus, e.g. the major fatty acids were C 15 : 0 anteiso and C 15 : 0 iso, the polar lipid profile contained the major components diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine, and the major quinone was menaquinone MK-7. Physiological and biochemical test results were slightly different from those of the most closely related species. For this reason, JJ-3 T represents a novel species of the genus Neobacillus , for which we propose the name Neobacillus rhizosphaerae sp. nov., with JJ-3 T (= CIP 111895 T =LMG 32087 T =DSM 111784 T =CCM 9084 T ) as the type strain. We also propose to reclassify Bacillus dielmonensis as Neobacillus dielmonensis comb. nov. based mainly on the results of phylogenomic and conserved signature indel analyses.
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