Genome architecture and tetrasomic inheritance of autotetraploid potato

(Molecular Plant 15, 1211–1226; July 4 2022) In the original version of our published manuscript, Table 1 contained errors starting from the Assembly-BUSCO section due to content duplication and misaligned rows. We now provide a corrected version of Table 1 below that rectifies the inaccuracies. This correction does not affect the results and conclusions presented in the article. We sincerely apologize for any inconvenience that this may have caused.Table 1Metrics of the C88 genome assembly (Corrected)Genomic featuresC88_H1C88_H2C88_H3C88_H4C88.v1Assembly statisticsTotal assembly size of contigs (Mb)829.15788.22774.43763.593,155.39Number of contigs9744015945212,490Maximum contig length (Mb)51.7647.2946.8647.1751.76N50 contig length (Mb)18.7319.1616.5820.6018.78N90 contig length (Mb)1.734.601.832.652.83L50 contig1413141252L90 contig59425949203Number of scaffolds7501522752391,416N50 scaffold length (Mb)64.5561.9959.9061.9659.90Sequence on chromosomes (%)94.5498.1094.6497.9596.28Assembly-BUSCOComplete (%)97.197.797.297.098.3Complete and single-copy (%)94.195.094.394.40.9Complete and duplicated (%)3.02.72.92.697.4Fragmented (%)0.80.70.60.70.4Missing (%)2.11.62.22.31.2Annotation-BUSCOComplete (%)94.395.394.793.899.2Complete and single-copy (%)57.258.259.061.01.2Complete and duplicated (%)37.137.135.732.898.0Fragmented (%)1.11.21.21.00.2Missing (%)4.63.54.15.20.6 Open table in a new tab Genome architecture and tetrasomic inheritance of autotetraploid potatoBao et al.Molecular PlantJune 21, 2022In BriefWe achieved a chromosome-scale, haplotype-resolved genome assembly of a widely grown potato variety, Cooperation-88 (C88), with the combined state-of-the-art sequencing technologies and polyploid graph binning. Extensive differences on pericentromeric sequence and gene expression, and uneven double reduction landscape were revealed within four haplotypes, which shaped the genomic architecture of the cultivated potato. Masking of heterozygous deleterious mutations and accumulation of functional alleles contributed the fine commodity properties of C88. Full-Text PDF Open Access