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Identification of disulfidptosis-related genes and analysis of immune infiltration characteristics in ischemic strokes

免疫系统 小桶 缺血性中风 生物 计算生物学 基因 渗透(HVAC) 免疫学 医学 基因表达 转录组 缺血 遗传学 内科学 物理 热力学
作者
Rongxing Qin,Lijuan Huang,Wei‐Hua Xu,Qingchun Qin,Xiaojun Liang,XuanYang Lai,Xiao‐Ying Huang,Minshan Xie,Li Chen
出处
期刊:Mathematical Biosciences and Engineering [Arizona State University]
卷期号:20 (10): 18939-18959
标识
DOI:10.3934/mbe.2023838
摘要

<abstract> <p>Immune infiltration plays a pivotal role in the pathogenesis of ischemic stroke. A novel form of cell death known as disulfidptosis has emerged in recent studies. However, there is currently a lack of research investigating the regulatory mechanism of disulfidptosis-related genes in immune infiltration during ischemic stroke. Using machine learning methods, we identified candidate key disulfidptosis-related genes (DRGs). Subsequently, we performed an analysis of immune cell infiltration to investigate the dysregulation of immune cells in the context of ischemic stroke. We assessed their diagnostic value by employing receiver operating characteristic (ROC) curves. To gain further insights, we conducted functional enrichment analyses to elucidate the signaling pathways associated with these seven DRGs. We identified two distinct subclusters based on the expression patterns of these seven DRGs. The unique roles of these subclusters were further evaluated through KEGG analysis and immune infiltration studies. Furthermore, we validated the expression profiles of these seven DRGs using both single-cell datasets and external datasets. Lastly, molecular docking was performed to explore potential drugs for the treatment of ischemic stroke. We identified seven DRGs. The seven DRGs are related to immune cells. Additionally, these seven DRGs also demonstrate potential diagnostic value in ischemic stroke. Functional enrichment analysis highlighted pathways such as platelet aggregation and platelet activation. Two subclusters related to disulfidptosis were defined, and functional enrichment analysis of their differentially expressed genes (DEGs) primarily involved pathways like cytokine-cytokine receptor interaction. Single-cell analysis indicated that these seven DRGs were primarily distributed among immune cell types. Molecular docking results suggested that genistein might be a potential therapeutic drug. This study has opened up new avenues for exploring the causes of ischemic stroke and developing potential therapeutic targets.</p> </abstract>
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