NCI Program for Natural Product Discovery: A Publicly-Accessible Library of Natural Product Fractions for High-Throughput Screening

天然产物 天然产物研究 药物发现 产品(数学) 计算生物学 计算机科学 生物 生物信息学 生物化学 几何学 数学 生物活性 生药学 体外
作者
Christopher C. Thornburg,John R. Britt,Jason R. Evans,Rhone K. Akee,James A. Whitt,Spencer K. Trinh,Matthew Harris,Jerell R. Thompson,Teresa L. Ewing,Suzanne M. Shipley,Paul G. Grothaus,David Newman,Joel P. Schneider,Tanja Grkovic,Barry R. O’Keefe
出处
期刊:ACS Chemical Biology [American Chemical Society]
卷期号:13 (9): 2484-2497 被引量:114
标识
DOI:10.1021/acschembio.8b00389
摘要

The US National Cancer Institute's (NCI) Natural Product Repository is one of the world's largest, most diverse collections of natural products containing over 230,000 unique extracts derived from plant, marine, and microbial organisms that have been collected from biodiverse regions throughout the world. Importantly, this national resource is available to the research community for the screening of extracts and the isolation of bioactive natural products. However, despite the success of natural products in drug discovery, compatibility issues that make extracts challenging for liquid handling systems, extended timelines that complicate natural product-based drug discovery efforts and the presence of pan-assay interfering compounds have reduced enthusiasm for the high-throughput screening (HTS) of crude natural product extract libraries in targeted assay systems. To address these limitations, the NCI Program for Natural Product Discovery (NPNPD), a newly launched, national program to advance natural product discovery technologies and facilitate the discovery of structurally defined, validated lead molecules ready for translation will create a prefractionated library from over 125,000 natural product extracts with the aim of producing a publicly-accessible, HTS-amenable library of >1,000,000 fractions. This library, representing perhaps the largest accumulation of natural-product based fractions in the world, will be made available free of charge in 384-well plates for screening against all disease states in an effort to reinvigorate natural product-based drug discovery.

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