生物转化
微生物群
化学
羟基化
去甲基化
色谱法
新陈代谢
质谱法
生物化学
计算生物学
生物
生物信息学
酶
基因表达
基因
DNA甲基化
作者
Chong‐Zhi Wang,Jin‐Yi Wan,Jin‐Yi Wan,Jing-Xuan Wan,Jing-Xuan Wan,Shilei Wang,Yun Luo,Jinxiang Zeng,Haiqiang Yao,Chunfeng Zhang,Qi‐Hui Zhang,Wamtinga Richard Sawadogo,Ming Xu,Wei Du,Lian‐Wen Qi,Ping Li,Chun‐Su Yuan
摘要
Oplopanax horridus, widely distributed in North America, is an herbal medicine traditionally used by Pacific indigenous peoples for various medical conditions. After oral ingestion, constituents in O. horridus extract (OhE) could be converted to their metabolites by the enteric microbiome before absorption. In this study, in order to mimic gut environment, the OhE was biotransformed using the enteric microbiome of healthy human subjects. For accurate and reliable data collection with optimized approaches in sample preparation and analytical conditions, ultra-performance liquid chromatography and quadrupole time-of-flight mass spectrometry were used to characterize parent constituents and their metabolites. In the extract, 20 parent compounds were identified including polyynes, sesquiterpenes, monoterpeondids, phenylpropanoids and phenolic acids. After the biotransformation, a total of 78 metabolites were identified, of which 37 belonged to polyynes metabolites. The common biotransformation pathways are hydroxylation, acetylization, methylation and demethylation. Based on the pathway distributions, the metabolism signature of OhE has been explored. The metabolism pathways of OhE compounds are dependent on their structural classifications and hydrophilic/hydrophobic properties. In summary, with comprehensive analysis, we systematically investigated human microbiome-derived OhE metabolites. The enteric microbial metabolism signature provides novel information for future effective use of O. horridus.
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