生物
计算生物学
优先次序
全基因组关联研究
药物发现
疾病
基因组
精密医学
遗传学
生物信息学
基因
单核苷酸多态性
基因型
医学
病理
经济
管理科学
作者
Hai Fang,Hans Wolf,Bogdan Knezevic,Katie L. Burnham,Julie Osgood,Anna Sanniti,Alicia Lledó Lara,Silva Kasela,Stéphane De Cesco,Jörg K. Wegner,Lahiru Handunnetthi,Fiona E. McCann,Liye Chen,Takuya Sekine,Paul E. Brennan,Brian D. Marsden,David Damerell,Christopher A. O’Callaghan,C. Bountra,Paul Bowness
出处
期刊:Nature Genetics
[Nature Portfolio]
日期:2019-06-28
卷期号:51 (7): 1082-1091
被引量:219
标识
DOI:10.1038/s41588-019-0456-1
摘要
Most candidate drugs currently fail later-stage clinical trials, largely due to poor prediction of efficacy on early target selection1. Drug targets with genetic support are more likely to be therapeutically valid2,3, but the translational use of genome-scale data such as from genome-wide association studies for drug target discovery in complex diseases remains challenging4-6. Here, we show that integration of functional genomic and immune-related annotations, together with knowledge of network connectivity, maximizes the informativeness of genetics for target validation, defining the target prioritization landscape for 30 immune traits at the gene and pathway level. We demonstrate how our genetics-led drug target prioritization approach (the priority index) successfully identifies current therapeutics, predicts activity in high-throughput cellular screens (including L1000, CRISPR, mutagenesis and patient-derived cell assays), enables prioritization of under-explored targets and allows for determination of target-level trait relationships. The priority index is an open-access, scalable system accelerating early-stage drug target selection for immune-mediated disease.
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