Multi-omics landscape of Interferon-stimulated gene OASL reveals a potential biomarker in pan-cancer: from prognosis to tumor microenvironment

肿瘤微环境 生物 癌症研究 干扰素 免疫系统 转录组 计算生物学 免疫疗法 癌症 基因 免疫学 基因表达 遗传学
作者
Yi Liu,Runyu Yang,Mengyao Zhang,Bingyu Yang,Yue Du,Hui Feng,Wenjuan Wang,Busheng Xue,F. Niu,Pengcheng He
出处
期刊:Frontiers in Immunology [Frontiers Media]
卷期号:15: 1402951-1402951 被引量:6
标识
DOI:10.3389/fimmu.2024.1402951
摘要

Background OASL (Oligoadenylate Synthetase-Like), an interferon-induced protein in the OAS family, plays a significant role in anti-viral response. Studies have demonstrated its association with prognosis of certain tumors. However, the mechanism through which OASL affects tumors is unclear. A systemic pan-cancer study of OASL needs to be illustrated. Methods Analysis of OASL expression across 33 tumors was conducted utilizing TCGA, GTEx and CPTAC databases. COX and Log-Rank regressions were employed to calculate the prognosis. We validated the impact of OASL on apoptosis, migration, and invasion in pancreatic cancer cell lines. Moreover, we employed seven algorithms in bulk data to investigate the association of OASL expression and immune cell infiltration within tumor immune microenvironment (TIME) and ultimately validated at single-cell transcriptome level. Results We discovered elevated expression of OASL and its genetic heterogeneity in certain tumors, which link closely to prognosis. Validation experiments were conducted in PAAD and confirmed these findings. Additionally, OASL regulates immune checkpoint ligand such as programmed death ligand 1 (PD-L1), through IFN-γ/STAT1 and IL-6/JAK/STAT3 pathways in tumor cells. Meanwhile, OASL affects macrophages infiltration in TIME. By these mechanisms OASL could cause dysfunction of cytotoxic T lymphocytes (CTLs) in tumors. Discussion Multi-omics analysis reveals OASL as a prognostic and immunological biomarker in pan-cancer.
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