Comparison of the phytoestrogen trans‐resveratrol (3,4′,5‐trihydroxystilbene) structures from x‐ray diffraction and solution NMR

化学 蛋白质数据库 白藜芦醇 结晶学 晶体结构 核磁共振谱数据库 二面角 质子核磁共振 立体化学 二维核磁共振波谱 异核单量子相干光谱 分子 谱线 氢键 有机化学 物理 生物化学 天文
作者
Fernando Commodari,Abdesslem Khiat,Sanae Ibrahimi,Alison R. Brizius,Noah Kalkstein
出处
期刊:Magnetic Resonance in Chemistry [Wiley]
卷期号:43 (7): 567-572 被引量:22
标识
DOI:10.1002/mrc.1583
摘要

Abstract The NMR‐derived solution structure of trans ‐3,4′,5‐trihydroxystilbene (resveratrol) was compared with two recent literature crystal x‐ray structures, resveratrol in complex with human transthyretin (TTR‐RES) from 1DVS.pdb and resveratrol bound to chalcone synthase (CHS‐RES) from 1CGZ.pdb. 1 H and 13 C NMR spectra of resveratrol were acquired in DMSO‐ d 6 . Assignments were obtained from an analysis of DQF‐COSY, TOCSY, DEPT, HMQC/HSQC, HMBC and INADEQUATE NMR spectra. Past 1 H and 13 C NMR literature assignments are corrected. The dihedral angle 2–1–1′–2′ provides an indication of the relative spatial orientation of the two phenolic rings. Values of 1.62, − 54.10 and 12.6 ± 1.1adeg were found for the 1DVS.pdb, 1CGZ.pdb and NMR resveratrol structures, respectively. The 1DVS.pdb resveratrol structure is ‘flat’ with the two phenolic rings along the same plane. The 1CGZ.pdb structure has these two rings almost orthogonal to each other, and the NMR structure has these two rings much closer to being along the same plane. The angles 1–α—α′ and 1′–α′—α are along the same trace and of similar magnitude for the 1CGZ.pdb and NMR resveratrol structures. For the 1DVS.pdb resveratrol structure, these angles are about 7–10° greater, with α and α′ being 180° out‐of‐phase from the other two structures. The α rings did not overlap, with the NMR result representing a ‘median model’ of the two x‐ray structures. Copyright © 2005 John Wiley & Sons, Ltd.
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