A network pharmacology approach to explore the potential targets underlying the effect of sinomenine on rheumatoid arthritis

小桶 计算生物学 青藤碱 系统药理学 基因 生物信息学 类风湿性关节炎 医学 生物 药理学 转录组 遗传学 基因表达 药品 免疫学
作者
Xiang Guo,Jinyu Ji,Zhaoyong Feng,Xiaoqiang Hou,Yanan Luo,Zhigang Mei
出处
期刊:International Immunopharmacology [Elsevier BV]
卷期号:80: 106201-106201 被引量:39
标识
DOI:10.1016/j.intimp.2020.106201
摘要

To explore the potential targets underlying the effect of sinomenine (SIN) on rheumatoid arthritis (RA) by utilizing a network pharmacology approach. SIN and its drug targets were identified using network analysis followed by experimental validation. First, the Pharmmapper, UniProt and GeneCards databases were mined for information relevant to the prediction of SIN targets and RA-related targets. Second, the SIN-target gene and SIN-RA target gene networks were created in Cytoscape software followed by the collection of the candidate targets of each component by R software. Eventually, the key targets and enriched pathways were examined by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Sixty-seven potential targets of SIN and 3797 related targets involved in RA were subjected to network analysis, and the 20 intersection targets indicated the principal pathways linked to RA. Additionally, 16 key targets, which were linked to more than three genes, were determined to be crucial genes. GO analysis showed that 14 biological processes, 5 cellular components and 2 molecular functions were identified, when corrected by a P value ≤ 0.01. Seven related signaling pathways were identified by KEGG analysis, when corrected according to a Bonferroni P value ≤ 0.05. The present study explored the potential targets and signaling pathways of SIN during the treatment of RA, which may help to illustrate the mechanism (s) involved in the action of SIN and may provide a better understanding of its anti-rheumatoid arthritis effects in terms of inhibiting angiogenesis, synovial hyperplasia, and bone destruction.
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