Lignin fortifies cell walls and improves drought resilience, yet the molecular drivers of lignification in safflower (Carthamus tinctorius L.) are poorly defined. Hydroxycinnamoyl-CoA shikimates/quinate hydroxycinnamoyl transferase (HCT) is one of the key regulatory enzymes in the lignin biosynthesis pathway. In this study, we aimed to characterize the role of a specific CtHCT gene in lignin biosynthesis and drought response by mining safflower expression atlas comprising 79 HCT genes. The spatiotemporal expression bias identified a candidate CtHCT061 gene encoding a BAHD acyltransferase containing conserved HXXXD and DFGWG motifs. Furthermore, Agrobacterium-mediated over-expression of CtHCT061 in Arabidopsis evidently enhanced drought tolerance by decreasing MDA and H₂O₂ levels by ∼35 % and ∼40 %, respectively, and increasing proline accumulation by ∼45 %. Similarly, transient overexpression of CtHCT061 in safflower also showed improved drought resilience by increasing lignin content (∼30–40 %) and upregulating key lignin biosynthesis genes (CtCCR, ∼8-fold; CtCAD, ∼9-fold), concurrently mitigating oxidative stress and increasing proline accumulation. On the contrary, Silencing CtHCT061 via VIGS led to a > 60 % reduction in CtCCR and CtCAD transcript levels, a ∼35 % decrease in lignin accumulation, and stunted growth, highlighting its critical role in modulating drought resilience. These findings positioned CtHCT061 as a key regulator of BAHD-mediated lignin flux for engineering drought resilient plants and promoting sustainable agriculture in the future.