Shinella sedimenti sp. nov., isolated from sediment of Zhairuo Island located in the East China Sea

16S核糖体RNA 生物 系统发育树 拉伤 磷脂酰甘油 黄杆菌科 微生物学 植物 基因 细菌 拟杆菌 遗传学 磷脂 解剖 磷脂酰胆碱
作者
Gen Chen,Min He,Kejing Li,Kaiwen Zheng,Xing-Xing Tang,Sanjit Chandra Debnath,Pinmei Wang,Zhen Guo,Yi Hong,Dao‐Qiong Zheng
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:73 (8) 被引量:1
标识
DOI:10.1099/ijsem.0.006000
摘要

A Gram-negative, rod-shaped and aerobic bacterial strain B3.7T, was isolated from the sediment of Zhairuo Island, Zhoushan city, Zhejiang Province, PR China. Maximum growth of strain B3.7T was observed at 30 °C when cultured in a medium containing 0.5 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences demonstrated that strain B3.7T belonged to the genus Shinella; it showed the highest sequence similarity of 98.47 % to Shinella kummerowiae CCBAU 25048T. The average nucleotide identity and digital DNA-DNA hybridization values between strain B3.7T and its reference strains were 82.9-84.2 % and 26.1-27.3 %, respectively. Chemotaxonomic analysis indicated that the sole respiratory quinone was Q-10 and the predominant cellular fatty acids were C19 : 0 cyclo ω8c, C16 : 0, C18 : 1 ω7c 11-methyl and summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c). The polar lipid profile was composed of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, three unidentified phospholipids and two unidentified aminolipids. Collectively, strain B3.7T can be considered to represent a novel species, for which the name Shinella sedimenti sp. nov. is proposed. The type strain is B3.7T (=MCCC 1K07163T=LMG 32559T).
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