Profile of Podocyte Translatome During Development of Type 2 and Type 1 Diabetic Nephropathy Using Podocyte-Specific TRAP mRNA RNA-seq

足细胞 波多辛 糖尿病肾病 细胞生物学 尼福林 生物 内科学 内分泌学 下调和上调 分子生物学 化学
作者
Yinqiu Wang,Aolei Niu,Yu Pan,Shirong Cao,Andrew S.Terker,Suwan Wang,Xiaofeng Fan,Cynthia L Toth,Marisol A Ramirez Solano,Danielle L Michell,Danielle Contreras,Ryan M Allen,Wanying Zhu,Quanhu Sheng,Agnes B. Fogo,Kasey C Vickers,Ming-Zhi Zhang,Raymond C. Harris
标识
DOI:10.2337/figshare.14888034
摘要

Podocyte injury is important in development of diabetic nephropathy (DN). Although several studies have reported single cell-based RNA-seq of podocytes in type 1 DN (T1DN), the podocyte translating mRNA profile in type 2 DN (T2DN) <u>has not been previously compared</u> to that of T1DN. <u>We</u> analyzed the podocyte translatome in T2DN in podocin-Cre; Rosa26<sup>fsTRAP</sup>; eNOS-/-; <i>db/db </i>mice and compared it to streptozotocin-induced T1DN in podocin-Cre; Rosa26<sup>fsTRAP</sup>; eNOS-/- mice utilizing Translating Ribosome Affinity Purification (TRAP) and RNA-seq. Over 125 genes were highly enriched in the podocyte ribosome. More podocyte TRAP genes were differentially expressed in T2DN compared to T1DN. TGF-β signaling pathway genes were upregulated while MAPK pathway genes were downregulated only in T2DN while ATP binding and cAMP-mediated signaling genes were downregulated only in T1DN. Genes regulating actin filament organization and apoptosis increased while genes regulating VEGFR signaling and glomerular basement membrane components decreased in both type 1 and type 2 diabetic podocytes. A number diabetes-induced genes not previously been linked to podocyte injury <u>were confirmed in both</u> <u>mouse and human DN</u>. Differences and similarities in the podocyte translatome in T2DN and T1DN can identify factors underlying the pathophysiology of DN and novel therapeutic targets to treat diabetes-induced podocyte injury.
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