CircRNA-Phf21a_0002 promotes pyroptosis to aggravate hepatic ischemia/ reperfusion injury by sponging let-7b-5p

上睑下垂 再灌注损伤 缺血 竞争性内源性RNA 下调和上调 小桶 环状RNA 生物 细胞生物学 癌症研究 医学 程序性细胞死亡 基因表达 细胞凋亡 基因 内科学 生物化学 长非编码RNA 转录组
作者
Peng Jiang,Xinqiang Li,Yuntai Shen,Lijian Luo,Bin Wu,Dahong Teng,Jinshan Wang,Muhammad Imran,Qingguo Xu,Shipeng Li,Bin Zhang,Jinzhen Cai
出处
期刊:Heliyon [Elsevier BV]
卷期号:10 (16): e34385-e34385 被引量:2
标识
DOI:10.1016/j.heliyon.2024.e34385
摘要

•By utilizing bioinformatics and sequencing technologies, the expression profile and biological functions of circular RNAs have been elucidated, particularly their role in the competitive endogenous RNA network.•Experimental validation has shown that upregulation of circRNA-Phf21a_0002 exacerbates hepatocellular pyroptosis in an in vitro model of hepatic ischemia-reperfusion injury.•CircRNA-Phf21a_0002 has been shown to modulate pyroptosis by functioning as a ceRNA to sponge let-7b-5p molecules in an in vitro model of hepatic ischemia-reperfusion injury.•Further validation suggests the potential of circRNA-Phf21a_0002 in regulating hepatic ischemia-reperfusion injury through the let-7b-5p/Bach1 network. Hepatic ischemia‒reperfusion injury is a common injury in liver surgery and liver transplantation that can lead to liver function damage, including oxidative stress, apoptosis, autophagy and inflammatory reactions. Pyroptosis is a type of inflammatory programmed cell death that has been implicated in ischemia‒reperfusion injury-associated inflammatory reactions. Although circular RNAs can regulate cell death in hepatic ischemia‒reperfusion injury, their relationship with pyroptosis remains unclear. Therefore, this study aimed to investigate the effect of circular RNA on pyroptosis in hepatic ischemia‒reperfusion injury. We constructed a mouse hepatic ischemia‒reperfusion injury model for circular RNA sequencing and obtained 40 circular RNAs with significant differential expression, of which 39 were upregulated and 1 was downregulated. Subsequently, the endogenous competitive RNA network was constructed using TarBase, miRTarBase, TargetScan, RNAhybrid, and miRanda. Gene Set Enrichment Analysis, Kyoto Encyclopedia of Genes and Genomes and Gene Ontology functional analyses of downstream target genes revealed that circRNA-Phf21a_0002 might affect pyroptosis by regulating the mTOR signaling pathway and Bach1 by sponging let-7b-5p. The overexpression plasmid upregulated the expression of circRNA-Phf21a_0002 in a hypoxia/reoxygenation model, which aggravated pyroptosis in AML12 cells and apoptosis and necrosis of hepatocytes. Next, we investigated the underlying mechanism and found that circRNA-Phf21a_0002 enabled the expression of Bach1 through sponging of let-7b-5p. The aggravation of pyroptosis via overexpression of circRNA-Phf21a_0002 was reversed by let-7b-5p mimics in hypoxia/reoxygenation-subjected AML12 cells. Collectively, our study clarifies that circRNA-Phf21a_0002 aggravates the pyroptosis of hepatocytes related to ischemia-reperfusion by sponging let-7b-5p. These findings provide new molecular mechanisms and novel biomarkers for follow-up treatment. Hepatic ischemia‒reperfusion injury is a common injury in liver surgery and liver transplantation that can lead to liver function damage, including oxidative stress, apoptosis, autophagy and inflammatory reactions. Pyroptosis is a type of inflammatory programmed cell death that has been implicated in ischemia‒reperfusion injury-associated inflammatory reactions. Although circular RNAs can regulate cell death in hepatic ischemia‒reperfusion injury, their relationship with pyroptosis remains unclear. Therefore, this study aimed to investigate the effect of circular RNA on pyroptosis in hepatic ischemia‒reperfusion injury. We constructed a mouse hepatic ischemia‒reperfusion injury model for circular RNA sequencing and obtained 40 circular RNAs with significant differential expression, of which 39 were upregulated and 1 was downregulated. Subsequently, the endogenous competitive RNA network was constructed using TarBase, miRTarBase, TargetScan, RNAhybrid, and miRanda. Gene Set Enrichment Analysis, Kyoto Encyclopedia of Genes and Genomes and Gene Ontology functional analyses of downstream target genes revealed that circRNA-Phf21a_0002 might affect pyroptosis by regulating the mTOR signaling pathway and Bach1 by sponging let-7b-5p. The overexpression plasmid upregulated the expression of circRNA-Phf21a_0002 in a hypoxia/reoxygenation model, which aggravated pyroptosis in AML12 cells and apoptosis and necrosis of hepatocytes. Next, we investigated the underlying mechanism and found that circRNA-Phf21a_0002 enabled the expression of Bach1 through sponging of let-7b-5p. The aggravation of pyroptosis via overexpression of circRNA-Phf21a_0002 was reversed by let-7b-5p mimics in hypoxia/reoxygenation-subjected AML12 cells. Collectively, our study clarifies that circRNA-Phf21a_0002 aggravates the pyroptosis of hepatocytes related to ischemia-reperfusion by sponging let-7b-5p. These findings provide new molecular mechanisms and novel biomarkers for follow-up treatment. ischemia-reperfusion injury gasdermin D circular RNA competing endogenous RNA Gene set enrichment analysis Kyoto Encyclopedia of Genes and Genome Gene Ontology principal component analysis alanine aminotransferase aspartate aminotransferase immunohistochemistry overexpression negative control fluorescence in situ hybridization miRNA response elements biological process cellular component molecular function hypoxia/reoxygenation
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
穿林打夜发布了新的文献求助10
1秒前
Garland应助张艺兴的咩咩采纳,获得10
1秒前
鹅鹅Namae应助HUIZHEV5采纳,获得10
2秒前
2秒前
小蘑菇应助Arjun采纳,获得10
3秒前
3秒前
田様应助可青采纳,获得10
4秒前
彩色涔完成签到,获得积分20
4秒前
不明完成签到 ,获得积分10
4秒前
5秒前
科目三应助苗条的衫采纳,获得10
6秒前
科研通AI6.4应助APS采纳,获得10
6秒前
6秒前
彩色涔发布了新的文献求助30
7秒前
7秒前
锦瑟完成签到 ,获得积分20
7秒前
优雅破茧发布了新的文献求助10
8秒前
8秒前
Me发布了新的文献求助10
11秒前
11秒前
穿林打夜完成签到,获得积分10
11秒前
小方发布了新的文献求助30
11秒前
小民完成签到 ,获得积分10
12秒前
cc应助miracle采纳,获得10
13秒前
充电宝应助MauriceH采纳,获得10
13秒前
Zhou完成签到,获得积分0
13秒前
14秒前
慕容平安完成签到,获得积分10
14秒前
orixero应助悦雨采纳,获得10
14秒前
华仔应助DDYY采纳,获得10
14秒前
15秒前
火影忍者完成签到,获得积分10
15秒前
猫车高手发布了新的文献求助10
15秒前
15秒前
16秒前
NexusExplorer应助高贵振家采纳,获得10
16秒前
文静紫烟应助lanmo采纳,获得10
16秒前
19秒前
19秒前
无言务实发布了新的文献求助10
19秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Effects of Two Weeks of Red Light Therapy on Choroidal Thickness and Axial Length in Young Adults 700
Positive Art Therapy Theory and Practice 600
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
Key mechanistic insights into the intramolecular C-H bond amination and double bond aziridination in sulfamate esters catalyzed by dirhodium tetracarboxylate complexes 500
The Neuroscience of Language 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7671493
求助须知:如何正确求助?哪些是违规求助? 9238655
关于积分的说明 19897202
捐赠科研通 7240957
什么是DOI,文献DOI怎么找? 3285054
关于科研通互助平台的介绍 2443327
邀请新用户注册赠送积分活动 2287208