Exploring the plankton bacteria diversity and distribution patterns in the surface water of northwest pacific ocean by metagenomic methods

浮游细菌 拟杆菌 皮科普兰顿 基因组 原绿藻 生物 浮游生物 生态学 放线菌门 无氧光合作用 水团 蛋白质细菌 蓝藻 海洋学 浮游植物 联合球菌 细菌 营养物 16S核糖体RNA 地质学 生物化学 遗传学 基因
作者
Yafei Wang,Lin Hong-mei,Ranran Huang,Weidong Zhai
出处
期刊:Frontiers in Marine Science [Frontiers Media SA]
卷期号:10 被引量:2
标识
DOI:10.3389/fmars.2023.1177401
摘要

The study of marine microbial communities is crucial for comprehending the distribution patterns, adaptations to the environment, and the functioning of marine microorganisms. Despite being one of the largest biomes on Earth, the bacterioplankton communities in the Northwest Pacific Ocean (NWPO) remain understudied. In this research, we aimed to investigate the structure of the surface bacterioplankton communities in different water masses of the NWPO. We utilized metagenomic sequencing techniques and cited previous 16S rRNA data to explore the distribution patterns of bacterioplankton in different seasons. Our results revealed that Cyanobacteria, Proteobacteria, Bacteroidetes, and Actinobacteria dominated the microbial communities, accounting for over 95% of the total. During spring, we observed significant differentiation in community structure between the different water masses. For instance, Prochlorococcus and Pseudoalteromonas were primarily distributed in the nutrient-deficient subtropical countercurrent zone, while Flavobacteriaceae and Rhodobacteraceae were found in the Kuroshio-Oyashio mixing zone. During summer, the surface planktonic bacteria communities became homogenized across regions, with Cyanobacteria becoming the dominant group (68.6% to 84.9% relative abundance). The metabolic processes of the microorganisms were dominated by carbohydrate metabolism, followed by amino acid transport and metabolism. However, there was a low relative abundance of functional genes involved in carbohydrate metabolism in the Kuroshio-Oyashio mixing zone. The metagenomic data had assembled 37 metagenomic-assembled genomes (MAGs), which belong to Proteobacteria, Bacteroidetes, and Euryarchaeota. In conclusion, our findings highlight the diversity of the surface bacterioplankton community composition in the NWPO, and its distinct geographic distribution characteristics and seasonal variations.
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