脱硫弧菌
生物
拉伤
细菌
系统发育树
微生物学
普通脱硫弧菌
基因
基因组
系统发育学
遗传学
DNA
微需氧菌
16S核糖体RNA
核苷酸多样性
表型
核糖体RNA
作者
Marnie Barham,Melinda J. Mayer,Kathryn Gotts,Arjan Narbad,Lizbeth Sayavedra
标识
DOI:10.1099/ijsem.0.007296
摘要
Three strictly anaerobic, Gram‐negative, curved rod‐shaped bacteria, designated strains QI0430 T , QI0434 T and QI0442 T , were isolated from faecal samples of healthy adult donors in the UK. Phylogenomic analysis based on 31 single-copy marker genes showed that all three isolates formed distinct lineages. Whole-genome average nucleotide identity and digital DNA–DNA hybridization values between each isolate and its nearest phylogenetic neighbours were <95.6 and <63%, respectively, supporting their status as separate species. Genome sizes ranged from 3.41 to 3.59 Mb, with DNA G+C contents of 56.91–57.43 mol%. QI0430 was a non-motile, rod-shaped, catalase-negative bacterium that grew optimally at 37 °C, pH 7.5 and 0% (wt/v) NaCl. QI0434 was a motile, rod-shaped, catalase-negative bacterium that grew optimally at 30 °C, pH 7.0–8.0 and 0–0.9% (wt/v) NaCl. QI0442 was a non-motile, rod-shaped, catalase-negative bacterium that grew optimally at 30–37 °C, pH 9.0 and optimum 0% (wt/v) NaCl. Based on phylogenomic, phenotypic and chemotaxonomic differences, the following three novel species are proposed: Desulfovibrio intestinivivus sp. nov. (type strain QI0430 T =DSM 120530=NCIMB 15620 T ), Desulfovibrio desulfopostgatei sp. nov. (type strain QI0434 T =DSM 120532=NCIMB 15621 T ) and Desulfovibrio faecalis sp. nov. (type strain QI0442 T =DSM 120531=NCIMB 15622 T ).
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