Experimental Spectroscopic, Structural (Monomer and Dimer), Molecular Docking, Molecular Dynamics Simulation and Hirshfeld Surface Analysis of 2-Amino-6-Methylpyridine

化学 分子动力学 自然键轨道 分子间力 超极化率 离域电子 密度泛函理论 计算化学 穆利肯种群分析 分子几何学 物理化学 基准集 溶剂化 分子 结晶学 有机化学 极化率
作者
Aysha Fatima,Meenakshi Singh,Khamael M. Abualnaja,Khaled Althubeiti,S. Muthu,Nazia Siddiqui,Saleem Javed
出处
期刊:Polycyclic Aromatic Compounds [Taylor & Francis]
卷期号:43 (5): 3910-3940 被引量:6
标识
DOI:10.1080/10406638.2022.2080726
摘要

2-Amino-6-methylpyridine (2-AMP) was investigated experimentally using FT-IR, 1H, NMR, and UV-Vis spectra, as well as theoretically using DFT calculations. The quantum computational calculations (the optimized structure, FT-IR, NMR and UV-Vis.) to support experimental data were performed by DFT approach at B3LYP functional and 6–311 + +G(d,p) basis set. The optimized molecular geometry and wavenumber calculations were done in the gas phase, while theoretical NMR was performed in Chloroform (CHCL3) solvation. The “Potential Energy Distribution analysis” (PED) of the title compound was performed with VEDA analysis and these assignments were compared with the experimental FT-IR spectrum. Hirshfeld analysis was also performed and analyzed intermolecular interactions on the surface of crystal, However, the most significant contributions to the Hirshfeld surface come from N···H (17.3%), C···H/H···C (23%) and H···H (68.8%). Chemical reactivity studies, Molecular Electrostatic Potential (MEP) maps, and surface area maps were also conducted. To show electron delocalization in the molecule, researchers used the electron localization function (ELF). Other topics included topological and mulliken charge distribution studies. Natural Bond Order Analysis (NBO) was performed to interpret intermolecular charge transfer.The effect of temperature on thermodynamical parameters such as Gibbs free energy, enthalpy, and entropy was examined. TD-DFT analysis was also used to shed more light on how the electronic transitions in the UV–Vis spectra were estimated. For different solvents, the estimated maximum wavelength (λ) absorbance and the band-gap energy of 2-AMP were calculated and compared to experimental results. The molecule's bioactivity is described theoretically using the Electrophilicity index and the interaction between the ligand-protein is depicted using Molecular docking. The proteins 3DQS, 4UX6, 5ADF, 5TUD, and 6E9L were studied via molecular docking. The nature of the molecule was determined by its drug-likeness. A molecular dynamics simulation was used to explore biomolecular stability.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
1900th发布了新的文献求助10
刚刚
屁特完成签到,获得积分10
1秒前
2秒前
简单灵竹发布了新的文献求助10
3秒前
3秒前
小小怪完成签到,获得积分10
3秒前
4秒前
5秒前
在工位不敢工作完成签到,获得积分10
5秒前
开朗以亦发布了新的文献求助10
5秒前
5秒前
6秒前
qaxt完成签到,获得积分10
7秒前
ldkshifo完成签到,获得积分10
7秒前
雷伊发布了新的文献求助10
7秒前
8秒前
8秒前
Phoebe完成签到 ,获得积分10
8秒前
miles发布了新的文献求助10
9秒前
10秒前
ccc发布了新的文献求助10
10秒前
有魅力的超短裙完成签到,获得积分10
10秒前
wanci应助LanDepp采纳,获得10
11秒前
共享精神应助陈飞宇采纳,获得10
11秒前
狒狒完成签到,获得积分20
11秒前
12秒前
zhangj完成签到 ,获得积分10
12秒前
13秒前
科研通AI6.4应助July采纳,获得10
14秒前
cwn完成签到,获得积分10
14秒前
狒狒发布了新的文献求助18
14秒前
Ronnie完成签到 ,获得积分10
16秒前
1900th完成签到,获得积分20
16秒前
天穹雨应助低功耗糖果采纳,获得20
17秒前
知行合一完成签到 ,获得积分10
17秒前
lzy发布了新的文献求助10
17秒前
FOX发布了新的文献求助10
18秒前
顾矜应助耳冉采纳,获得10
19秒前
vision发布了新的文献求助10
19秒前
科研通AI6.4应助安然采纳,获得10
20秒前
高分求助中
Principles of Economics, 11th Edition 10000
University Physics with Modern Physics, 16th edition 10000
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Development of a Bridge Weigh-In-Motion System: A technology to convert the bridge response to the passage of traffic into data on vehicle configurations, speeds, times of travel and weights 1000
Current concepts in cutaneous toxicity : proceedings of the Fourth Conference on Cutaneous Toxicity, Washington, D.C., May 9-11, 1979 1000
ズームレンズの光学設計に関する研究 800
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 700
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7280112
求助须知:如何正确求助?哪些是违规求助? 8901189
关于积分的说明 18828206
捐赠科研通 6952161
什么是DOI,文献DOI怎么找? 3207313
关于科研通互助平台的介绍 2377610
邀请新用户注册赠送积分活动 2182320