桑格测序
候选基因
外显子组测序
生物
遗传学
复合杂合度
基因
表型
突变
作者
Hong Pan,Shijing Wu,Jing Wang,Tian Zhu,Tengyan Li,Bo Wan,Beihong Liu,Yan Luo,Xu Ma,Ruifang Sui,Binbin Wang
标识
DOI:10.1136/jmedgenet-2018-105684
摘要
Background High myopia (HM) is one of the leading causes of vision impairment worldwide, accompanied by a series of pathological ocular complications. Studies have shown that genetic factors play an important role in the pathogenesis of HM. The aim of our study is to identify a candidate gene for a large family with non-syndromic HM. Methods A large Chinese family, including 12 patients with non-syndromic HM, and 220 unrelated patients with HM, were recruited from the Department of Ophthalmology, Peking Union Medical College Hospital. Three affected subjects from the large family were selected to perform whole exome sequencing (WES). Rare heterozygous variants shared by all three subjects were retained and then Sanger sequencing was used to determine whether any of the remaining variants cosegregated with the disease phenotype. Furthermore, all coding regions of the candidate genes were analysed in 220 unrelated patients with HM. Immunofluorescence assay was used to detect the expression of the candidate gene in the eye. Annexin V/PI staining and flow cytometry were applied to detect cell apoptotic changes. Results WES identified a novel TNF receptor superfamily member 21 ( TNFRSF21 ) variant, P146A, in a large Chinese family with HM, and another three rare heterozygous variants (P202L, E240* and A440G) in TNFRSF21 were found in 220 unrelated cases with HM. Immunofluorescence assay indicated that it is strongly expressed in the mouse eye. Compared with the wild type, the P146A variant could significantly increase adult retinal pigment epithelial cell line-19 cell apoptotic levels. Conclusions Variants in TNFRSF21 cause non-syndromic HM in Chinese population.
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