Flavobacterium anseongense sp. nov. and Flavobacterium wongokense sp. nov., isolated from freshwater and freshwater soil in South Korea

16S核糖体RNA 生物 黄杆菌 系统发育树 基因组DNA 系统发育学 核糖体RNA 拉伤 基因组 微生物学 基因 细菌 遗传学 解剖 假单胞菌
作者
Jung-Hun Jo,Soon-Youl Lee,Se-Yoon Chun,Wan‐Taek Im
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (4)
标识
DOI:10.1099/ijsem.0.006724
摘要

Two novel, non-motile, Gram-stain-negative, rod-shaped bacterial strains, designated AS60 T and WG47 T , were isolated from freshwater in South Korea. To clarify their taxonomic positions, both strains were characterized based on genomic information, including 16S rRNA gene and draft genome sequences. Phylogenetic analyses revealed that both isolates belong to the genus Flavobacterium . Based on 16S rRNA gene sequencing, AS60 T clustered with Flavobacterium silvisoli KACC 21178 T (96.09%), Flavobacterium cheonhonense KACC 14967 T (96.07%) and Flavobacterium sangjuense KACC 17473 T (95.96%). Strain WG47 T showed the highest similarity to Flavobacterium dankookense KACC 23179 T (97.14%), F. cheonhonense KACC 14967 T (97.07%) and Flavobacterium chungnamense KACC 14971 T (96.71%). The draft genomes of AS60 T and WG47 T were 3.07 and 3.30 Mb, with G+C contents of 35.6 and 38.9 mol%, respectively. Average nucleotide identity (ANI) and digital DNA–DNA hybridization (dDDH) values were calculated. For AS60 T , ANI values compared to F. silvisoli KACC 21178 T , F. cheonhonense KACC 14967 T and WG47 T were 76.67, 79.38 and 76.01%, respectively, with dDDH values of 20, 19.6 and 22.1%. For WG47 T , ANI values compared to F. dankookense KACC 23179 T and F. cheonhonense KACC 14967 T were 75.12 and 74.75%, with dDDH values of 19.9 and 19.2%. Both strains exhibited MK-6 as the predominant respiratory quinone, and their fatty acid profiles included iso-C 15:1 , iso-C 15:0 3OH, iso-C 15:1 G, iso-C 16:0 , iso-C 16:0 3OH and iso-C 17:0 3OH. Phosphatidylethanolamine was the major polar lipid. Strain WG47 T was found to produce flexirubin-type pigments, while AS60 T did not. These results, combined with phenotypic and biochemical data, suggest that strains AS60 T and WG47 T represent two novel species of Flavobacterium , for which the names Flavobacterium anseongense sp. nov. (AS60 T =KACC 22413 T =LMG 32491 T ) and Flavobacterium wongokense sp. nov. (WG47 T =KACC 22407 T =LMG 32500 T ) are proposed.
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