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Alteromonas algae sp. nov. and Alteromonas ulvae sp. nov., isolated from the seaweed Ulva prolifera dominating green tides in the Yellow Sea

生物 别单胞菌属 16S核糖体RNA 系统发育树 植物 藻类 拉伤 细菌 微生物学 基因 遗传学 解剖
作者
Xiaojing Lv,Jin Zhao,Peng Jiang
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (10)
标识
DOI:10.1099/ijsem.0.006925
摘要

Strains A079 T and A081 T were isolated from the floating seaweed Ulva prolifera , which is the dominant species of the world’s largest green tides in the Yellow Sea. Both strains were Gram-stain-negative, aerobic and motile via a single polar flagellum. The major fatty acids of the two strains were C 16:0 , C 17:1 ω8c, C 18:1 ω7c and summed feature 3 (C 16:1 ω7c and/or C 16:1 ω6c). Cells of the strain A079 T were oval or short rod-shaped. Cells of the strain A081 T were rod-shaped. A079 T grew at 10–37 °C, pH 6.0–10.0 and 1–12% (w/v) NaCl. A081 T grew at 10–40 °C, pH 6.0–11.0 and 1–12% (w/v) NaCl. Phylogenetic analyses based on 16S rRNA genes and whole-genome sequences revealed that strains A079 T and A081 T belong to the genus Alteromonas . The average nucleotide identity and digital DNA–DNA hybridization values between strains A079 T , A081 T and related Alteromonas species ranged from 68.98 to 88.75% and 20.40 to 36.40%, respectively. Comparative genomic analysis discovered that A079 T possessed a unique RiPP-like (TP-1161) cluster. Strain A089 T exhibited the potential to utilize ulvan, and an acyl-homoserine lactone synthesis gene cluster was predicted in the strain. These findings reveal possible mechanisms for phycosphere adaptation. Phenotypic, chemotaxonomic, phylogenetic and genomic evidence support that strains A079 T and A081 T represent two novel species of the genus Alteromonas , for which the names Alteromonas algae sp. nov. (type strain A079 T =MCCC 1K09912 T =KCTC 18157 T ) and Alteromonas ulvae sp. nov. (type strain A081 T =MCCC 1K09913 T =KCTC 18158 T ) are proposed.
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