Multimodal cell mapping with optimal transport

Moscot is a cell-mapping framework based on the concept of optimal transport. It can analyse large-scale single-cell data, enabling mapping of the developmental trajectories of individual cells in and across organs. Moscot is scalable to millions of cells, and can track several cell characteristics simultaneously in space and time. An easy-to-use and scalable tool analyses single-cell data with optimal transport, tracking millions of cells at once.