Investigating potential ferroptosis‐related differentially expressed genes of UVB‐induced skin photodamage

小桶 基因 生物 基因表达 光老化 遗传学 计算生物学 转录组
作者
Li Deng,Yang Li,Qian Wu,QianWen Zeng,Yide He,AiJun Chen
出处
期刊:International Journal of Dermatology [Wiley]
卷期号:62 (1): 79-87 被引量:2
标识
DOI:10.1111/ijd.16472
摘要

Ultraviolet B (UVB) is one of the most dangerous insults for skin, which can cause skin sunburn, pigment disease, photoaging, and photocarcinogenesis. This study aimed to identify pathogenic genes related to ferroptosis in the skin of humans after UVB radiation.The gene expression profiles (GSE41078, GSE54413) were downloaded from the Gene Expression Omnibus (GEO) database, and the ferroptosis-related genes (FRGs) were downloaded from the Genecards database. To identify the differentially expressed genes (DEGs) and obtain differentially expressed FRGs by intersecting DEGs with FRGs. To identify the functional annotation and potential pathways by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. Differentially expressed FRGs-associated protein-protein interaction network (PPI) was performed by STRING database and Cytoscape software.A total of 628 co-expressed DEGs of the two profiles (GSE41078 and GSE54413) were identified, including 371 upregulated and 257 downregulated DEGs. A total of 32 differentially expressed FRGs were identified. The results of GO analyses showed that, in the biological processes, UVB had a great influence on the response to oxidative stress; in the molecular functions, UVB had a great influence on antioxidant activity; in the cellular components, UVB had a great influence on endocytic vesicle lumen. The key pathways of differentially expressed FRGs were identified by KEGG analyses. The most significant 12 central node genes were identified by PPI network.We identified differentially expressed FRGs candidate genes and pathways in UVB-induced skin photodamage, which could contribute to the development of new therapeutic targets for skin photodamage.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
很北的小北风完成签到,获得积分10
1秒前
一江湫完成签到,获得积分10
3秒前
5秒前
11秒前
vassallo发布了新的文献求助10
12秒前
14秒前
wang发布了新的文献求助10
16秒前
16秒前
打打应助Jay采纳,获得10
18秒前
Janney发布了新的文献求助10
19秒前
焱阳发布了新的文献求助10
20秒前
25秒前
华仔应助淡然短靴采纳,获得10
26秒前
英俊的铭应助12umi采纳,获得10
26秒前
黄超超发布了新的文献求助10
28秒前
LCCCC完成签到,获得积分10
28秒前
Lin发布了新的文献求助10
30秒前
33秒前
34秒前
35秒前
。。完成签到 ,获得积分10
35秒前
36秒前
17发布了新的文献求助10
38秒前
淡然短靴发布了新的文献求助10
38秒前
Eve发布了新的文献求助10
40秒前
41秒前
42秒前
香蕉觅云应助王嘉尔采纳,获得10
43秒前
科目三应助狂野的凡白采纳,获得10
43秒前
laola完成签到,获得积分10
44秒前
hhh完成签到 ,获得积分10
46秒前
48秒前
天天快乐应助科研小白采纳,获得10
50秒前
huibpyfy应助Lin采纳,获得10
52秒前
y彤发布了新的文献求助10
52秒前
夏侯夏侯完成签到 ,获得积分10
52秒前
春天里发布了新的文献求助10
53秒前
LR完成签到,获得积分10
53秒前
56秒前
57秒前
高分求助中
【本贴是提醒信息,请勿应助】请在求助之前详细阅读求助说明!!!! 20000
One Man Talking: Selected Essays of Shao Xunmei, 1929–1939 1000
The Three Stars Each: The Astrolabes and Related Texts 900
Yuwu Song, Biographical Dictionary of the People's Republic of China 800
Multifunctional Agriculture, A New Paradigm for European Agriculture and Rural Development 600
Challenges, Strategies, and Resiliency in Disaster and Risk Management 500
Bernd Ziesemer - Maos deutscher Topagent: Wie China die Bundesrepublik eroberte 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 有机化学 工程类 生物化学 纳米技术 物理 内科学 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 电极 光电子学 量子力学
热门帖子
关注 科研通微信公众号,转发送积分 2481796
求助须知:如何正确求助?哪些是违规求助? 2144399
关于积分的说明 5469867
捐赠科研通 1866912
什么是DOI,文献DOI怎么找? 927910
版权声明 563039
科研通“疑难数据库(出版商)”最低求助积分说明 496404