The use of sulfur (S) stable isotopes to study S metabolism in plants is still limited by the relatively small number of studies. It is generally accepted that less S stable isotope discrimination occurs during sulfate (SO 4 2– ) uptake. However, S metabolism and allocation are expected to produce separations of S stable isotopes among the different plant S pools and organs. In this study, we measured the S isotope composition of the main S pools of rice plants grown under different SO 4 2– availabilities in appropriate closed and open hydroponic-plant systems. The main results indicate that fractionation against 34 S occurred during SO 4 2– uptake. Fractionation was dependent on the amount of residual SO 4 2– in the solution, showing a biphasic behavior related to the relative expression of two SO 4 2– transporter genes ( OsSULTR1;1 and OsSULTR1;2 ) in the roots. S isotope separations among S pools and organs were also observed as the result of substantial S isotope fractionations and mixing effects occurring during SO 4 2– assimilation and plant S partitioning. Since the S stable isotope separations conserve the memory of the physiological and metabolic activities that determined them, we here underline the potential of the 32 S/ 34 S analysis for the detailed characterization of the metabolic and molecular processes involved in plant S nutrition and homeostasis.