化学
戒指(化学)
配体(生物化学)
Atom(片上系统)
基准集
苯
结晶学
相互作用能
分子物理学
灵活性(工程)
计算化学
原子物理学
化学物理
分子
物理
密度泛函理论
数学
生物化学
有机化学
计算机科学
统计
受体
嵌入式系统
作者
Yumi Imai,Yoshihisa Inoue,Isao Nakanishi,Kazuo Kitaura
出处
期刊:Qsar & Combinatorial Science
[Wiley]
日期:2009-06-08
卷期号:28 (8): 869-873
被引量:20
标识
DOI:10.1002/qsar.200860168
摘要
Abstract A geometry analysis of Cl–π interactions in protein–ligand complex crystal structures, showed two distinct geometries: “edge‐on” approach of a Cl atom to a ring atom or CC bond and “face‐on” approach towards the ring centroid, with an average interatomic distance of 3.6 Å. The interaction energies were estimated as a sum of the CCSD(T) correlation contribution and the Hartree–Fock energy at the complete basis set limit, for the geometries of the benzene–chlorohydrocarbon model structures at the energy minimum obtained by potential energy surface scans using RMP2(FC)/cc‐pVTZ. The calculated Cl–π interaction energy was −2.01 kcal/mol, and the dispersion force was found to be the major source of attraction. We also discuss the geometry flexibility in Cl–π interactions.
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