生物
增殖镰刀菌
苹果属植物
基因组
病菌
基因
毒力
镰刀菌
全基因组测序
顺序装配
次生代谢物
遗传学
微生物学
植物
基因表达
转录组
作者
Yanan Duan,S R,X S Chen,Xiang Shen,Chengmiao Yin,Zhiquan Mao
出处
期刊:Plant Disease
[Scientific Societies]
日期:2022-12-31
标识
DOI:10.1094/pdis-06-22-1352-a
摘要
Apple replant disease (ARD) caused by the fungal pathogen Fusarium proliferatum f. sp. malus domestica (Fpmd) MR5 brings annual losses to apple production within China. However, the genomic information of the pathogen is not yet available. Here, we obtained the whole-genome sequence of the highly virulent Fpmd MR5 using the Illumina PE150 platform. The genome size was 42.76 Mb and consisted of 9,047 genes. The GC content was 48.80%, and several genes potentially associated with pathogenicity were identified, such as carbohydrate-active enzymes, secreted proteins, and secondary metabolite gene clusters. There were 260 specific virulence factor genes, mainly related to fungal vegetative growth and the production of cell wall-degrading enzymes. These data will aid future studies investigating host–pathogen interactions and help us develop suitable disease management strategies.
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