Arthrobacter caoxuetaonis sp. nov., Arthrobacter zhangbolii sp. nov. and Arthrobacter gengyunqii sp. nov., isolated from Marmota himalayana faeces from Qinghai-Tibet Plateau

生物 16S核糖体RNA 节杆菌 系统发育树 微生物学 基因组DNA 拉伤 分子生物学 基因 细菌 遗传学 解剖
作者
Yue Liu,Gui Zhang,H. J. Yang,Yanpeng Cheng,Lin Ye,Xin‐He Lai,Caixin Yang,Caiyun Ma,Yuanmeihui Tao,Dong Jin,Shan Lu,Liyun Liu,Jianguo Xu
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:73 (4) 被引量:5
标识
DOI:10.1099/ijsem.0.005742
摘要

Six aerobic or facultative anaerobic, motile, Gram-stain-positive, catalase-positive and oxidase-negative strains (zg-Y453 T , zg-Y324, zg-Y462 T , zg-Y411, zg-Y809 T and zg-Y786) were isolated from different faecal samples of Marmota himalayana from the Qinghai–Tibet Plateau. Pale yellow, round, raised and moist colonies appeared 48 h after incubation at 28 °C on brain–heart infusion plates supplemented with 5 % defibrinated sheep blood. According to the 16S rRNA gene sequence alignment, two strain pairs (zg-Y453 T /zg-Y324 and zg-Y462 T /zg-Y411) shared the highest similarities to Arthrobacter luteolus (99.5 and 99.2 %), and the other one (zg-Y809 T /zg-Y786) to Arthrobacter citreus (99.5 %). Results of phylogenetic analysis based on the 16S rRNA gene and genome sequences showed that these six strains represented three separate species within the genus Arthrobacter . The average nucleotide identity and digital DNA–DNA hybridization values between the three novel type strains (zg-Y453 T /zg-Y462 T /zg-Y809 T ) and other known species in this genus were all below respective thresholds (70.2–81.5/19.6–24.2 %, 70.6–81.8/19.8–25.0 %, and 70.4–88.2/19.9–35.3 %). Although phylogenetically related, there were obvious chemotaxonomic and phenotypic differences: strain pair zg-Y462 T /zg-Y411 had anteiso- C 15 : 0 as the only major fatty acid; the three novel species had different dominant quinones, MK-8(H 2 ) in strains zg-Y462 T /zg-Y809 T (74.8/81.1 %) and MK-8(H 2 )/MK-9(H 2 ) (43.1/53.0 %) in zg-Y453 T ; similarly, the ability to reduce nitrate in strains zg-Y453 T and zg-Y462 T could differentiate them from zg-Y809 T . All strains had diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol, but differed slightly in the types of unidentified glycolipids, phospholipids and lipids. Based on the results of these polyphasic taxonomic analyses, three novel species within the genus Arthrobacter are proposed, namely Arthrobacter caoxuetaonis sp. nov. (type strain, zg-Y453 T =GDMCC 1.2809 T =JCM 35173 T ), Arthrobacter zhangbolii sp. nov. (type strain, zg-Y462 T =GDMCC 1.2880 T =JCM 35170 T ) and Arthrobacter gengyunqii sp. nov. (type strain, zg-Y809 T =GDMCC 1.2808 T =JCM 35168 T ).

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