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Simultaneous Formation of a Foldamer and a Self-Replicator by Out-of-Equilibrium Dynamic Covalent Chemistry

化学 福尔达默 耗散系统 吉布斯自由能 放热反应 折叠(DSP实现) 生命系统 分子内力 化学物理 计算化学 热力学 立体化学 有机化学 生物 电气工程 物理 工程类 生态学
作者
Ankush Sood,Pradeep K. Mandal,Jim Ottelé,Juntian Wu,Marcel Eleveld,Joydev Hatai,Charalampos G. Pappas,Ivan Huc,Sijbren Otto
出处
期刊:Journal of the American Chemical Society [American Chemical Society]
卷期号:146 (49): 33386-33394 被引量:8
标识
DOI:10.1021/jacs.4c09111
摘要

Systems chemistry has emerged as a useful paradigm to access structures and phenomena typically exhibited by living systems, including complex molecular systems such as self-replicators and foldamers. As we progress further toward the noncovalent synthesis of life-like systems, and eventually life itself, it is necessary to gain control over assembly pathways. Dissipative chemical fueling has enabled access to stable populations of (self-assembled) structures that would normally form only transiently. Here, we report a synthetic dynamic combinatorial library, made from a single structurally simple building block, from which a self-replicator and a foldamer can emerge along two distinct and competing pathways through an inter- or intramolecular assembly process, respectively. A fueled chemical reaction cycle is then set up to generate the foldamer transiently, in the presence of the self-replicator. The partitioning of the building block between the folding and self-replication pathways and the duration of the fueled reaction cycles are controlled by adjusting the amount of the chemical fuel. An out-of-equilibrium steady state involving the two assemblies could also be achieved by using a continuous stirred tank reactor with inflow and outflow of material. This work connects the domains of folding and self-replication in synthetic systems through dissipative out-of-equilibrium chemistry. It demonstrates that foldamers and self-replicators, formed from the same building block, can stably coexist if the system is continuously supplied with energy, while at equilibrium, the Gibbs phase rule prohibits such coexistence.
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