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Identification and experimental validation of PYCARD as a crucial PANoptosis- related gene for immune response and inflammation in COPD

炎症 鉴定(生物学) 慢性阻塞性肺病 免疫系统 免疫学 医学 计算生物学 生物 生态学 内科学
作者
Rui Shi,Ruihong Liang,Fang Wang,Lueli Wang,Wuyi Zidai,Jie Zhang,Min Luo,Xiaohua Du,Shibo Sun,Chuang Xiao,Chaozhong Li,Xuewu Liang,Alex F. Chen,Weimin Ye
出处
期刊:Research Square - Research Square
标识
DOI:10.21203/rs.3.rs-3915790/v1
摘要

Abstract Objective Chronic inflammatory and immune responses play key roles in the development and progression of chronic obstructive pulmonary disease (COPD). PANoptosis, as a unique inflammatory cell death modality, is involved in the pathogenesis of many inflammatory diseases. We aim to identify critical PANoptosis-related biomarkers and explore their potential effects on respiratory tract diseases and immune infiltration landscapes in COPD. Methods Total microarray data consisting of peripheral blood and lung tissue datasets associated with COPD were obtained from the GEO database. PANoptosis-associated genes in COPD were identified by intersecting differentially expressed genes (DEGs) with genes involved in pyroptosis, apoptosis, and necroptosis after normalizing and removing the batch effect. Furthermore, GO, KEGG, PPI network, WGCNA, LASSO-COX, and ROC curves analysis were conducted to screen and verify hub genes, and the correlation between PYCARD and infiltrated immune cells was analyzed. The effect of PYCARD on respiratory tract diseases and the potential small-molecule agents for the treatment of COPD were identified. PYCARD expression was verified in the lung tissue of CS/LPS-induced COPD mice. Results PYCARD was a critical PANoptosis-related gene in all COPD patients. PYCARD was positively related to NOD-like receptor signaling pathway and promoted immune cell infiltration. Moreover, PYCARD was significantly activated in COPD mice mainly by targeting PANoptosis. Conclusion PANoptosis-related gene PYCARD is a potential biomarker for COPD diagnosis and treatment.
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