Uncovering of Key Pathways and miRNAs for Intracranial Aneurysm Based on Weighted Gene Co-Expression Network Analysis

小RNA 基因 生物 计算生物学 基因表达 基因调控网络 信使核糖核酸 基因表达调控 功能(生物学) 基因共表达网络 生物信息学 遗传学 基因本体论
作者
Zhengfei Ma,Ping Zhong,Peidong Yue,Zhongwu Sun
出处
期刊:European Neurology [Karger Publishers]
卷期号:85 (3): 212-223 被引量:2
标识
DOI:10.1159/000521390
摘要

Intracranial aneurysm (IA) is a serious cerebrovascular disease. The identification of key regulatory genes can provide research directions for early diagnosis and treatment of IA.Initially, the miRNA and mRNA data were downloaded from the Gene Expression Omnibus database. Subsequently, the limma package in R was used to screen for differentially expressed genes. In order to investigate the function of the differentially expressed genes, a functional enrichment analysis was performed. Moreover, weighted gene co-expression network analysis (WGCNA) was performed to identify the hub module and hub miRNAs. The correlations between miRNAs and mRNAs were assessed by constructing miRNA-mRNA regulatory networks. In addition, in vitro validation was performed. Finally, diagnostic analysis and electronic expression verification were performed on the GSE122897 dataset.In the present study, 955 differentially expressed mRNAs (DEmRNAs, 480 with increased and 475 with decreased expression) and 46 differentially expressed miRNAs (DEmiRNAs, 36 with increased and 10 with decreased expression) were identified. WGCNA demonstrated that the yellow module was the hub module. Moreover, 16 hub miRNAs were identified. A total of 1,124 negatively regulated miRNA-mRNA relationship pairs were identified. Functional analysis demonstrated that DEmRNAs in the targeted network were enriched in vascular smooth muscle contraction and focal adhesion pathways. In addition, the area under the curve of 16 hub miRNAs was >0.8. It is implied that 16 hub miRNAs may be used as potential diagnostic biomarkers of IA.Hub miRNAs and key signaling pathways were identified by bioinformatics analysis. This evidence lays the foundation for understanding the underlying molecular mechanisms of IA and provided potential therapeutic targets for the treatment of this disease.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
www完成签到,获得积分10
刚刚
情怀应助CL采纳,获得10
1秒前
1秒前
华仔应助牛诗悦采纳,获得10
1秒前
2秒前
程大柿完成签到,获得积分10
3秒前
小土狗完成签到,获得积分10
5秒前
氢描氮写发布了新的文献求助10
6秒前
ashore发布了新的文献求助10
6秒前
6秒前
10秒前
10秒前
小二郎应助氢描氮写采纳,获得10
10秒前
Cai完成签到,获得积分10
11秒前
柏木了完成签到 ,获得积分10
11秒前
12秒前
12秒前
啊哈发布了新的文献求助10
13秒前
14秒前
wanci应助spring采纳,获得10
15秒前
小小发布了新的文献求助10
15秒前
无花果应助动听泥猴桃采纳,获得10
16秒前
ba完成签到,获得积分10
18秒前
是阮软不是懒懒完成签到 ,获得积分10
19秒前
19秒前
HJX完成签到,获得积分10
20秒前
20秒前
烟花应助小小采纳,获得10
21秒前
淡淡的白羊完成签到 ,获得积分10
22秒前
22秒前
22秒前
旗树树发布了新的文献求助10
24秒前
25秒前
KEEP发布了新的文献求助10
26秒前
yxsoon发布了新的文献求助10
26秒前
aaaaaaffgtggttgt完成签到,获得积分20
27秒前
小蘑菇应助Zerolii采纳,获得10
28秒前
杨修发布了新的文献求助10
28秒前
SICHEN完成签到 ,获得积分10
29秒前
29秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
晶种分解过程与铝酸钠溶液混合强度关系的探讨 8888
Les Mantodea de Guyane Insecta, Polyneoptera 2000
Leading Academic-Practice Partnerships in Nursing and Healthcare: A Paradigm for Change 800
Signals, Systems, and Signal Processing 610
The Sage Handbook of Digital Labour 600
The formation of Australian attitudes towards China, 1918-1941 600
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6417020
求助须知:如何正确求助?哪些是违规求助? 8236083
关于积分的说明 17494657
捐赠科研通 5469829
什么是DOI,文献DOI怎么找? 2889699
邀请新用户注册赠送积分活动 1866660
关于科研通互助平台的介绍 1703788