A network pharmacology approach to elucidate the anti-inflammatory effects of ellagic acid

鞣花酸 小桶 化学 对接(动物) 药理学 多酚 AKT1型 计算生物学 生物化学 抗氧化剂 立体化学 信号转导 生物 医学 基因表达 基因 护理部 转录组 PI3K/AKT/mTOR通路
作者
Skyler H. Hoang,Hue Dao,Emerson My Lam
出处
期刊:Journal of Biomolecular Structure & Dynamics [Informa]
卷期号:42 (14): 7409-7420 被引量:8
标识
DOI:10.1080/07391102.2023.2240417
摘要

Ellagic acid (EA) is a naturally occurring polyphenolic compound found in various fruits and vegetables like strawberries, raspberries, pomegranates, and nuts such as pecans and walnuts. With its antioxidant properties, EA has shown potential health benefits, although further research is necessary to fully comprehend its effects, mechanisms, and safe and effective application as a complementary medicine. Notably, there is accumulating evidence of EA's anti-inflammatory effects; however, the precise underlying mechanism remains unclear. To investigate the anti-inflammatory properties of EA, a network pharmacology approach was employed. The study identified 52 inflammation-related targets of EA and revealed significant signaling pathways and relevant diseases associated with inflammation through GO and KEGG analysis. Furthermore, topological analysis identified 10 important targets, including AKT1, VEGFA, TNF, MAPK3, ALB, SELP, MMP9, MMP2, PTGS2, and ICAM1. Molecular docking and molecular dynamics simulations were conducted, indicating that AKT1, PTGS2, VEGFA, and MAPK3 are the most likely targets of EA, as evidenced by their molecular mechanics Poisson-Boltzmann surface area binding energy calculations. In summary, this study not only confirmed the anti-inflammatory effects of EA observed in previous research but also identified the most probable targets of EA.Communicated by Ramaswamy H. Sarma.

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