The reactivity-driven biochemical mechanism of covalent KRASG12C inhibitors

克拉斯 小分子 化学 机制(生物学) 体外 生物化学 化学生物学 血浆蛋白结合 计算生物学 突变 细胞生物学 生物 基因 认识论 哲学
作者
Rasmus Hansen,Ulf Peters,Anjali Babbar,Yuching Chen,Jun Feng,Matthew R. Janes,Lian‐Sheng Li,Pingda Ren,Yi Liu,Patrick P. Zarrinkar
出处
期刊:Nature Structural & Molecular Biology [Nature Portfolio]
卷期号:25 (6): 454-462 被引量:129
标识
DOI:10.1038/s41594-018-0061-5
摘要

Activating mutations in KRAS are among the most common tumor driver mutations. Until recently, KRAS had been considered undruggable with small molecules; the discovery of the covalent KRASG12C inhibitors ARS-853 and ARS-1620 has demonstrated that it is feasible to inhibit KRAS with high potency in cells and animals. Although the biological activity of these inhibitors has been described, the biochemical mechanism of how the compounds achieve potent inhibition remained incompletely understood. We now show that the activity of ARS-853 and ARS-1620 is primarily driven by KRAS-mediated catalysis of the chemical reaction with Cys12 in human KRASG12C, while the reversible binding affinity is weak, in the hundreds of micromolar or higher range. The mechanism resolves how an induced, shallow and dynamic pocket not expected to support high-affinity binding of small molecules can nevertheless be targeted with potent inhibitors and may be applicable to other targets conventionally considered undruggable.
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