Exploring the Post Mortem Interval (PMI) Estimation Model by circRNA circRnf169 in Mouse Liver Tissue

环状RNA 肝组织 生物 计算生物学 外显子 核糖核酸 实时聚合酶链反应 内含子 基因 分子生物学 生物信息学 遗传学 内分泌学
作者
Jiewen Fu,Jiewen Fu,Binghui Song,Qian Jie,Jingliang Cheng,Sawitree Chiampanichayakul,Songyot Anuchapreeda,Junjiang Fu,Junjiang Fu
出处
期刊:International Journal of Molecular Sciences [Multidisciplinary Digital Publishing Institute]
卷期号:26 (3): 1046-1046 被引量:8
标识
DOI:10.3390/ijms26031046
摘要

Estimating the post mortem interval (PMI) is a crucial and contentious issue in forensic research, particularly in criminal cases. Traditional methods for PMI estimation are limited by constraints and inaccuracies. Circular RNA (circRNA), formed through exon or intron looping to create a complete circular structure without a 5′ end cap and a 3′ poly(A) tail, exhibits exceptional stability, abundance, and tissue-specific characteristics that make it potentially valuable for PMI estimation. However, research on the exploration or application of circRNA in PMI estimation has been limited. This study aims to investigate the correlation between circRNA and PMI. In this study, liver tissue samples were collected from mice at six different time points at 4 °C, 18 °C, 25 °C, and 35 °C, respectively. The reference gene 28S rRNA and the biomarker circRnf169 were successfully screened. Quantitative PCR was employed to examine the correlation between circRnf169 levels and PMI. At 4 °C, the level of circRnf169 decreased with prolonged PMI, whereas at 18 °C, 25 °C, and 35 °C, the circRnf169 RNA was degraded rapidly, indicating that circRnf169 is suitable for PMI estimation at low temperatures or early PMI. These findings suggest the establishment of mathematical model for early PMI based on circRnf169 using liver tissue, which may serve as a reliable marker. Further research is required in order to develop more markers in mice and/or to validate these mathematical models in human samples.

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