Identification crucial genes in peripheral neuropathic pain induced by spared nerve injury.

SNi公司 小桶 神经损伤 周围神经损伤 神经病理性疼痛 微阵列分析技术 基因 基因表达 病态的 微阵列 基因表达谱 医学 生物信息学 生物 神经科学 基因本体论 周围神经 内科学 遗传学 解剖 水解 生物化学 酸水解
作者
Yang Yk,Lu Xb,Yihui Wang,Yang Mm,Jiang Dm
出处
期刊:PubMed 卷期号:18 (15): 2152-9 被引量:12
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Peripheral neuropathic pain (PNP) is a kind of neuropathic pain caused by damage or disease that affects the peripheral nervous system. This study aimed to investigate the molecular mechanism of PNP and identify therapy targets for treating PNP in a spared nerve injury (SNI) model.Gene expression data with accession number of GSE18803 were downloaded from Gene Expression Omnibus (GEO). This dataset included microarray data of four kinds of rat samples (adult rats with SNI, adult rats with sham injury, neonate rats with SNI, and neonate rats with sham injury). Differentially expressed genes (DEGs) were identified by using Limma software package, and further, Gene Ontology (GO) function and pathway analysis of DEGs were performed through the DAVID online tools. Protein-protein interaction (PPI) network of DEGs were constructed by STRING online database, and co-expression networks were constructed through Cytoscape.Totally 111 DEGs which were specially differentially expressed in adult rats with SNI were identified. Functional enrichment analysis suggest the majority of DEGs were related with immune functions. By comparing the three lists of genes got from GO and KEGG enrichment analysis, PPI network, and co-expression network analysis, 15 crucial genes were identified.Pathological nerve pain might be associated with immune dysfunctions and the 15 crucial genes might play an important role in the development of pathological nerve pain and have potential to be therapy targets.

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