德隆
化学
计算生物学
生物化学
RNA剪接
连接器
蛋白质降解
选择性拼接
赖氨酸
小分子
转录组
生物
细胞生物学
蛋白质-蛋白质相互作用
蛋白质水解
肽序列
血浆蛋白结合
蛋白质组
蛋白质设计
泛素蛋白连接酶类
生物物理学
泛素
HEK 293细胞
纳米技术
蛋白质结构域
脚手架
超家族
螺旋线圈
蛋白质结构
蛋白质工程
酿酒酵母
蛋白质测序
作者
Yuhang Liu,Lu Chen,Bo Peng,Pei Zeng,Linhui Cao,Lü Huang,Lixin Zhou,Shuke Yang,Jun Wang,Yanli Sun,Lu Chen,Yixuan Feng,Taiting Shi,Qi Chen,Kehao Zhao,Jing Lu,Baishan Jiang,Wenchao Lu
摘要
Targeted protein degradation via molecular glues represents a powerful modality for modulating "undruggable" proteins. Herein, through proteomic profiling of a CRBN-binding library and rigorous structure-activity relationship (SAR) refinement, we report the discovery of dWBP4-1: a first-in-class, highly selective, CRBN-dependent molecular glue degrader of the spliceosome-associated scaffold protein WBP4. dWBP4-1 induces rapid, nanomolar degradation of WBP4 via a canonical G-loop-mediated mechanism, exhibiting exceptional proteome-wide selectivity with negligible transcriptomic or alternative splicing perturbation. Leveraging this highly specific target-glue interaction, we mapped the minimal WBP4 degron to a 41-amino-acid sequence to establish a compact, inducible chemical-genetic platform termed wTAG. When fused to diverse proteins of interest, wTAG enables robust, monotonic degradation devoid of the hook effect. While the wTAG system is highly versatile, we delineate its boundaries when applied to challenging targets like Cyclin D1, where factors such as steric hindrance, lysine availability, complex sequestration, and tag accessibility (N- vs. C-terminal fusion) must be carefully interrogated. Collectively, this study highlights the discovery of a highly selective WBP4 molecular glue and translates its underlying degron into a robust tool for precise protein control.
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