Structural dynamics and susceptibility of isobutylamido thiazolyl resorcinol (Thiamidol TM ) against human and mushroom tyrosinases

酪氨酸酶 化学 分子动力学 间苯二酚 立体化学 部分 活动站点 对接(动物) 酶动力学 计算化学 生物化学 有机化学 医学 护理部
作者
Panupong Mahalapbutr,Napat Nuramrum,Thanyada Rungrotmongkol,Napat Kongtaworn,Sahachai Sabuakham
出处
期刊:Journal of Biomolecular Structure & Dynamics [Informa]
卷期号:41 (21): 11810-11817 被引量:1
标识
DOI:10.1080/07391102.2023.2167001
摘要

Tyrosinase, a key enzyme catalyzing a rate-limiting step of the melanin production, has been the most promising target for suppressing hyperpigmentation. Although a number of tyrosinase inhibitors have been developed, most of those lack clinical efficacy as they were identified from using mushroom tyrosinase (mTyr) as the target. Previous study revealed that the inhibitory effect of isobutylamido thiazolyl resorcinol (ThiamidolTM) on human tyrosinase (hTyr) is ∼100 times higher than that on mTyr. In the present study, we aimed to investigate the structural dynamics and susceptibility of ThiamidolTM against hTyr and mTyr at the atomic level using molecular docking, molecular dynamics simulation, and free energy calculation based on the molecular mechanics/Poisson-Boltzmann surface area method. The obtained results revealed that the resorcinol moiety of ThiamidolTM was found to be embedded in the catalytic copper center, interacting with H180, H202, H211, F386, and H390 residues of hTyr as well as with F264 residue of mTyr, mostly through van der Waals interactions. However, the number of destabilizing residues was found to be more pronounced in the ThiamidolTM/mTyr complex than the ThiamidolTM/hTyr system, supported by the lower binding affinity of ThiamidolTM/mTyr complex as well as the higher water accessibility and the lower number of atomic contacts at the active site of mTyr. Altogether, the structural and energetic information from this work would be useful for further optimization of more potent human tyrosinase inhibitors based on ThiamidolTM scaffold.Communicated by Ramaswamy H. Sarma.
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