生物
转录组
计算生物学
核糖核酸
合成生物学
抄写(语言学)
基因
遗传学
基因表达
语言学
哲学
作者
Leena Putzeys,Laura Wicke,Ana Paula Brandão,Maarten Boon,Diana Priscila Penso Pires,Joana Azeredo,Jörg Vogel,Rob Lavigne,Milan Gerovac
标识
DOI:10.1016/j.mib.2023.102419
摘要
In the last decade, powerful high-throughput sequencing approaches have emerged to analyse microbial transcriptomes at a global scale. However, to date, applications of these approaches to microbial viruses such as phages remain scarce. Tailoring these techniques to virus-infected bacteria promises to obtain a detailed picture of the underexplored RNA biology and molecular processes during infection. In addition, transcriptome study of stress and perturbations induced by phages in their infected bacterial hosts is likely to reveal new fundamental mechanisms of bacterial metabolism and gene regulation. Here, we provide references and blueprints to implement emerging transcriptomic approaches towards addressing transcriptome architecture, RNA–RNA and RNA–protein interactions, RNA modifications, structures and heterogeneity of transcription profiles in infected cells that will provide guides for future directions in phage-centric therapeutic applications and microbial synthetic biology.
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