Metabolic profiling identifies the significance of caffeine metabolism in CKD

仿形(计算机编程) 新陈代谢 计算生物学 咖啡因 生物 生物信息学 生物化学 内分泌学 计算机科学 操作系统
作者
Xinghua Guo,Hongquan Peng,Peijia Liu,Leile Tang,Jia Fang,Chiwa Aoieong,Tou Tou,Tsungyang Tsai,Xun Liu
出处
期刊:Frontiers in Bioengineering and Biotechnology [Frontiers Media]
卷期号:11: 1006246-1006246 被引量:1
标识
DOI:10.3389/fbioe.2023.1006246
摘要

Background: With the development of chronic kidney disease (CKD), there are various changes in metabolites. However, the effect of these metabolites on the etiology, progression and prognosis of CKD remains unclear. Objective: We aimed to identify significant metabolic pathways in CKD progression by screening metabolites through metabolic profiling, thus identifying potential targets for CKD treatment. Methods: Clinical data were collected from 145 CKD participants. GFR (mGFR) was measured by the iohexol method and participants were divided into four groups according to their mGFR. Untargeted metabolomics analysis was performed via UPLC-MS/MSUPLC–MSMS/MS assays. Metabolomic data were analyzed by MetaboAnalyst 5.0, one-way ANOVA, principal component analysis (PCA), and partial least squares discriminant analysis (PLS-DA) to identify differential metabolites for further analysis. The open database sources of MBRole2.0, including KEGG and HMDB, were used to identify significant metabolic pathways in CKD progression. Results: Four metabolic pathways were classified as important in CKD progression, among which the most significant was caffeine metabolism. A total of 12 differential metabolites were enriched in caffeine metabolism, four of which decreased with the deterioration of the CKD stage, and two of which increased with the deterioration of the CKD stage. Of the four decreased metabolites, the most important was caffeine. Conclusion: Caffeine metabolism appears to be the most important pathway in the progression of CKD as identified by metabolic profiling. Caffeine is the most important metabolite that decreases with the deterioration of the CKD stage.

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