Local structure of dilute aqueous DMSO solutions, as seen from molecular dynamics simulations

溶剂化 摩尔分数 氢键 化学 分子动力学 水溶液 分子 溶剂化壳 二甲基亚砜 结晶学 计算化学 物理化学 有机化学
作者
Abdenacer Idrissi,Bogdan Marekha,Mohammed Barj,François Alexandre Miannay,Toshiyuki Takamuku,Vasilios Raptis,Jannis Samios,Pál Jedlovszky
出处
期刊:Journal of Chemical Physics [American Institute of Physics]
卷期号:146 (23): 234507-234507 被引量:19
标识
DOI:10.1063/1.4985630
摘要

The information about the structure of dimethyl sulfoxide (DMSO)-water mixtures at relatively low DMSO mole fractions is an important step in order to understand their cryoprotective properties as well as the solvation process of proteins and amino acids. Classical MD simulations, using the potential model combination that best reproduces the free energy of mixing of these compounds, are used to analyze the local structure of DMSO-water mixtures at DMSO mole fractions below 0.2. Significant changes in the local structure of DMSO are observed around the DMSO mole fraction of 0.1. The array of evidence, based on the cluster and the metric and topological parameters of the Voronoi polyhedra distributions, indicates that these changes are associated with the simultaneous increase of the number of DMSO-water and decrease of water-water hydrogen bonds with increasing DMSO concentration. The inversion between the dominance of these two types of H-bonds occurs around XDMSO = 0.1, above which the DMSO-DMSO interactions also start playing an important role. In other words, below the DMSO mole fraction of 0.1, DMSO molecules are mainly solvated by water molecules, while above it, their solvation shell consists of a mixture of water and DMSO. The trigonal, tetrahedral, and trigonal bipyramidal distributions of water shift to lower corresponding order parameter values indicating the loosening of these orientations. Adding DMSO does not affect the hydrogen bonding between a reference water molecule and its first neighbor hydrogen bonded water molecules, while it increases the bent hydrogen bond geometry involving the second ones. The close-packed local structure of the third, fourth, and fifth water neighbors also is reinforced. In accordance with previous theoretical and experimental data, the hydrogen bonding between water and the first, the second, and the third DMSO neighbors is stronger than that with its corresponding water neighbors. At a given DMSO mole fraction, the behavior of the intensity of the high orientational order parameter values indicates that water molecules are more ordered in the vicinity of the hydrophilic group while their structure is close-packed near the hydrophobic group of DMSO.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
小废材完成签到,获得积分10
刚刚
Owen应助张无凡采纳,获得10
1秒前
李健应助嘻嘻嘻采纳,获得30
1秒前
zhuoai完成签到,获得积分10
1秒前
1秒前
Mon发布了新的文献求助30
2秒前
2秒前
科研通AI6.2应助W sir采纳,获得10
3秒前
SHUNLI0205完成签到,获得积分10
3秒前
疯狂的曼香完成签到,获得积分10
3秒前
自然月亮发布了新的文献求助10
3秒前
Akim应助Roy采纳,获得10
3秒前
科研通AI2S应助成小调采纳,获得10
4秒前
Akim应助兴奋的惜天采纳,获得10
4秒前
研友_VZG7GZ应助成小调采纳,获得10
4秒前
田様应助anlikek采纳,获得10
4秒前
宁阿霜发布了新的文献求助20
4秒前
4秒前
Hello应助疯狂的雨南采纳,获得10
5秒前
5秒前
王五发布了新的文献求助10
5秒前
7秒前
七野完成签到,获得积分20
7秒前
7秒前
8秒前
8秒前
8秒前
现代的翠丝完成签到,获得积分10
8秒前
ding应助W sir采纳,获得10
9秒前
9秒前
Yliang完成签到,获得积分10
9秒前
9秒前
xxx发布了新的文献求助20
10秒前
wang完成签到,获得积分10
10秒前
run发布了新的文献求助10
12秒前
七野发布了新的文献求助10
13秒前
所所应助W sir采纳,获得10
13秒前
csj发布了新的文献求助30
14秒前
舒适忆枫发布了新的文献求助10
14秒前
14秒前
高分求助中
Principles of Economics, 11th Edition 10000
University Physics with Modern Physics, 16th edition 10000
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Environmental Leverage in Times of Climate Crisis: Product Standards, Carbon Border Measures and Preferential Trade Agreements 1000
Matrix Methods in Data Mining and Pattern Recognition 510
Social Skills Improvement System-Rating Scales--Chinese Version 500
Dynamische Polarisation von H-1 und B-11 in (CH-3)-3NBH-3 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7238010
求助须知:如何正确求助?哪些是违规求助? 8863356
关于积分的说明 18696009
捐赠科研通 6908170
什么是DOI,文献DOI怎么找? 3194221
关于科研通互助平台的介绍 2366294
邀请新用户注册赠送积分活动 2168783