Seasonal habitat use by brook trout, Salvelinus fontinalis (Mitchill), in a second‐order stream

Abstract Seasonal habitat use by over‐yearling and under‐yearling brook trout, Salvelinus fontinalis (Mitchill), was examined in a second‐order stream in north‐central Pennsylvania, USA. The habitat occupied by brook trout and available habitat were determined in a 0.5‐km stream reach during the spring, summer and autumn of 1989 and the spring and summer of 1990. Cover, depth, substrate and velocity were quantified from over 2000 observations of individual brook trout. Habitat used by under‐yearling brook trout was more uniform between seasons and years than that used by over‐yearling brook trout. Over‐yearling brook trout occupied areas with more cover and greater depth than did under‐yearling brook trout, suggesting ontogenetic shifts in these variables. Differences for velocity and substrate were not as great as those for cover and depth. The selection of areas with low water velocities governed trout habitat use in spring, whereas cover and depth were the most important habitat variables in summer and autumn. Principal component analysis showed that available habitat and trout habitat centroids diverged most in spring, indicating that habitat selection by brook trout may be greatest at this time.