Massilia soli sp. nov., isolated from soil

生物 16S核糖体RNA 拉伤 微生物学 系统发育树 细菌 磷脂酰甘油 基因组大小 基因 基因组 生物化学 遗传学 磷脂 解剖 磷脂酰胆碱
作者
Ju Hye Baek,Woonhee Baek,Wenting Ruan,Hye Su Jung,Sung Chul Lee,Che Ok Jeon
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:72 (2) 被引量:21
标识
DOI:10.1099/ijsem.0.005227
摘要

A Gram-stain-negative, catalase- and oxidase-positive and aerobic bacterium, designated strain R798T, was isolated from soil in South Korea. Cells were motile rods by means of a single polar flagellum. Growth of strain R798T was observed at 15-35 °C (optimum, 25-30 °C), pH 5.0-8.0 (optimum, 6.0) and 0-1.5 % NaCl (optimum, 0.3 %). Strain R798T contained ubiquinone-8 as the sole isoprenoid quinone, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c) and C16 : 0 as the major fatty acids and phosphatidylglycerol and phosphatidylethanolamine as the major polar lipids. The DNA G+C content of strain R798T calculated from the whole genome sequence was 63.3 mol%. Phylogenetic analyses based on the 16S rRNA gene and whole genome sequences revealed that strain R798T formed a distinct phyletic lineage within the genus Massilia. Strain R798T was most closely related to Massilia eurypsychrophila B528-3T with a 98.0 % 16S rRNA gene sequence similarity. Average nucleotide identity and digital DNA-DNA hybridization values between strain R798T and the type strain of M. eurypsychrophila were 79.2 and 22.7 %, respectively. Based on the phenotypic, chemotaxonomic and molecular analyses, strain R798T represents a novel species of the genus Massilia, for which the name Massilia soli sp. nov. is proposed. The type strain is R798T (=KACC 22114T=JCM 34601T).
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