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Association of PAX2 and Other Gene Mutations with the Clinical Manifestations of Renal Coloboma Syndrome

遗传学 基因 医学 生物信息学 生物
作者
Toshiya Okumura,Kengo Furuichi,Tomomi Higashide,Mayumi Sakurai,Shinichi Hashimoto,Yasuyuki Shinozaki,Akinori Hara,Yasunori Iwata,Norihiko Sakai,Kazuhisa Sugiyama,Shuichi Kaneko,Takashi Wada
出处
期刊:PLOS ONE [Public Library of Science]
卷期号:10 (11): e0142843-e0142843 被引量:49
标识
DOI:10.1371/journal.pone.0142843
摘要

Background Renal coloboma syndrome (RCS) is characterized by renal anomalies and optic nerve colobomas. PAX2 mutations contribute to RCS. However, approximately half of the patients with RCS have no mutation in PAX2 gene. Methods To investigate the incidence and effects of mutations of PAX2 and 25 candidate genes, patient genes were screened using next-generation sequence analysis, and candidate mutations were confirmed using Sanger sequencing. The correlation between mutations and clinical manifestation was evaluated. Result Thirty patients, including 26 patients (two families of five and two, 19 sporadic cases) with RCS, and 4 optic nerve coloboma only control cases were evaluated in the present study. Six PAX2 mutations in 21 probands [28%; two in family cohorts (n = 5 and n = 2) and in 4 out of 19 patients with sporadic disease] including four novel mutations were confirmed using Sanger sequencing. Moreover, four other sequence variants (CHD7, SALL4, KIF26B, and SIX4) were also confirmed, including a potentially pathogenic novel KIF26B mutation. Kidney function and proteinuria were more severe in patients with PAX2 mutations than in those without the mutation. Moreover, the coloboma score was significantly higher in patients with PAX2 gene mutations. Three out of five patients with PAX2 mutations had focal segmental glomerulosclerosis (FSGS) diagnosed from kidney biopsies. Conclusion The results of this study identify several new mutations of PAX2, and sequence variants in four additional genes, including a novel potentially pathogenic mutation in KIF26B, which may play a role in the pathogenesis of RCS.
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