化学
酰胺
醛
脱氨基
亚甲基
反应性(心理学)
胺气处理
催化作用
选择性
氧化脱氨基
密度泛函理论
催化循环
组合化学
立体化学
反应机理
功能群
磷化氢
肽键
反应中间体
侧链
烯丙基重排
药物化学
光化学
有机化学
共价键
选择性还原
氨基酸
甲基
群(周期表)
作者
Minna Zhi,Jiying Xu,Xing Yang,Lei Qin,Weiliang Dong,Lili Zhao
标识
DOI:10.1021/acs.joc.5c02620
摘要
Density functional theory (DFT) calculations were performed to elucidate the detailed mechanism of catalytic amide hydrogenation mediated by a Ru-PNNH complex bearing a tridentate ligand. Three key reactive sites were identified within the catalyst framework: the methylene group on the phosphine side arm (C1), the methylene group on the amine side arm (C4), and the amino group directly coordinated to the Ru center (N1). The catalytic cycle proceeds through three sequential stages: precatalyst activation, deamination, and aldehyde reduction. The deamination step in stage II, with a free energy barrier of 20.1 kcal/mol, is identified as the rate-determining step (RDS) of the overall catalysis. Among the three reactive sites, C4 shows the highest activity, serving as the key center for both the precatalyst activation and the aldehyde reduction stages. The Ru-coordinated amino group is crucial in the deamination stage, especially for C-N bond cleavage. Notably, a cooperative mechanism emerges during the deamination process, where C4 and N1 act in a complementary and alternating manner to drive the key steps. The synergistic interaction exemplifies metal-ligand cooperative catalysis, demonstrating how site-specific reactivity enhances the overall efficiency and selectivity of the transformation.
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