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Bioinformatics Analysis of Lactylation-Related Biomarkers and Potential Pathogenesis Mechanisms in Age-Related Macular Degeneration

黄斑变性 基因 发病机制 医学 生物信息学 基因表达 生物 计算生物学 遗传学 眼科 免疫学
作者
Chenwei Gui,Hao Yan,Rong Zhang,Guohong Zhou
出处
期刊:Current Genomics [Bentham Science Publishers]
卷期号:26
标识
DOI:10.2174/0113892029291661241114055924
摘要

Background: Lactylation is increasingly recognized to play a crucial role in human health and diseases. However, its involvement in age-related macular degeneration (AMD) remains largely unclear. Objective: The aim of this study was to identify and characterize the pivotal lactylation-related genes and explore their underlying mechanism in AMD. Methods: Gene expression profiles of AMD patients and control individuals were obtained and integrated from the GSE29801 and GSE50195 datasets. Differentially expressed genes (DEGs) were screened and intersected with lactylation-related genes for lactylation-related DEGs. Machine learning algorithms were used to identify hub genes associated with AMD. Subsequently, the selected hub genes were subject to correlation analysis, and reverse transcription quantitative real-time PCR (RT-qPCR) was used to detect the expression of hub genes in AMD patients and healthy control individuals. Results: A total of 68 lactylation-related DEGs in AMD were identified, and seven genes, including HMGN2, TOP2B, HNRNPH1, SF3A1, SRRM2, HIST1H1C, and HIST1H2BD were selected as key genes. RT-qPCR analysis validated that all 7 key genes were down-regulated in AMD patients. Conclusion: We identified seven lactylation-related key genes potentially associated with the progression of AMD, which might deepen our understanding of the underlying mechanisms involved in AMD and provide clues for the targeted therapy.
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