Parkinson’s Families Project: a UK-wide study of early onset and familial Parkinson’s disease

多重连接依赖探针扩增 家族史 基因分型 发病年龄 遗传学 SNP阵列 LRRK2 帕金森病 单核苷酸多态性 疾病 医学 生物 基因型 内科学 基因 外显子
作者
Clodagh Towns,Zih‐Hua Fang,Manuela Tan,Simona Jasaityte,Theresa M. Schmaderer,Eleanor J. Stafford,Miriam Pollard,Russel Tilney,Megan Hodgson,Lesley Wu,Robyn Labrum,Jason Hehir,James Polke,Lara M. Lange,Anthony H.V. Schapira,Kailash P. Bhatia,Andrew Singleton,Cornelis Blauwendraat,Christine Klein,Henry Houlden
标识
DOI:10.1101/2023.12.05.23299397
摘要

ABSTRACT The Parkinson’s Families Project is a UK-wide study aimed at identifying genetic variation associated with familial and early-onset Parkinson’s disease (PD). We recruited individuals with a clinical diagnosis of PD and age at motor symptom onset ≤ 45 years and/or a family history of PD in up to third-degree relatives. Where possible, we also recruited affected and unaffected relatives. We analysed DNA samples with a combination of single nucleotide polymorphism (SNP) array genotyping, multiplex ligation-dependent probe amplification (MLPA), and whole-genome sequencing (WGS). We investigated the association between identified pathogenic mutations and demographic and clinical factors such as age at motor symptom onset, family history, motor symptoms (MDS-UPDRS) and cognitive performance (MoCA). We performed baseline genetic analysis in 718 families, of which 205 had sporadic early-onset PD (sEOPD), 113 had familial early-onset PD (fEOPD), and 400 had late-onset familial PD (fLOPD). 69 (9.6%) of these families carried pathogenic variants in known monogenic PD-related genes. The rate of a molecular diagnosis increased to 28.1% in PD with motor onset ≤ 35 years. We identified pathogenic variants in LRRK2 in 4.2% of families, and biallelic pathogenic variants in PRKN in 3.6% of families. We also identified two families with SNCA duplications and three families with a pathogenic repeat expansion in ATXN2 , as well as single families with pathogenic variants in VCP , PINK1 , PNPLA6 , PLA2G6 , SPG7 , GCH1 , and RAB32 . An additional 73 (10.2%) families were carriers of at least one pathogenic or risk GBA1 variant. Most early-onset and familial PD cases do not have a known genetic cause, indicating that there are likely to be further monogenic causes for PD.
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