Two new members of the family Aerococcaceae: Tuanshanicoccus yangjingiae gen. nov., sp. nov. and Tuanshanicoccus lijuaniae sp. nov., isolated from the trachea of Marmota himalayana

生物 系统发育树 16S核糖体RNA 微生物学 基因 细菌 核糖体RNA 基因组 系统发育学 遗传学 属 兼性 分类学(生物学) 模式种 基因组DNA 动物 序列分析 比较基因组学 脂肪酸
作者
Gui Zhang,Yanpeng Cheng,Yue Liu,Dong Jin,Shan Lu,Weiguang Li,Ji Pu,Yajun Ge,Caiyun Ma,Wenbo Luo,Jianguo Xu
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (9)
标识
DOI:10.1099/ijsem.0.006911
摘要

Nine strains of two Gram-positive, facultative anaerobic, catalase-, oxidase- and urease-negative coccoid species, designated as zg-252 T , zg-1578, zg-B36, zg-ZUI334, and zg-1292 T , zg-A91, zg-BR9, zg-BR22 and zg-BR33, were isolated from the trachea of Marmota himalayana . The nine strains grew optimally at 37 °C, pH 7.0 and 0.5% NaCl. Comparative analysis of the 16S rRNA gene revealed that the two novel type strains were most closely related to each other, with low similarity to known species in the family Aerococcaceae . Phylogenetic analyses based on the 16S rRNA gene and genome suggested that the nine strains form two independent branches, well separated from all genera of this family. The genomic G+C contents of strains zg-252 T and zg-1292 T were 36.0 mol% and 37.8 mol%. Comparative genomic analysis proved that the nine strains represent two different novel species of a new genus. The major fatty acids of this novel genus were C 18 : 1 ω 9c and C 16 : 0 , with diphosphatidylglycerol and phosphatidylglycerol as the major polar lipids, but no quinones were detected. The two novel species shared cell-wall aa (glutamic acid, alanine and lysine) and cell-wall sugars (ribose; with additional glucose in zg-1292 T ). Based on the polyphasic analysis, we proposed that the unknown bacteria can be classified as Tuanshanicoccus gen. nov., with two species in this novel genus, type species Tuanshanicoccus yangjingiae gen. nov., sp. nov. (zg-252 T = GDMCC 1.1725 T = JCM 34096 T ) and Tuanshanicoccus lijuaniae sp. nov. (zg-1292 T = GDMCC 1.2118 T = KCTC 43284 T ).
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