Modern genomic techniques in the identification of genetic causes of cardiomyopathy

医学 外显子组测序 心肌病 基因检测 外显子组 疾病 遗传学 肥厚性心肌病 人口 生物信息学 表型 基因 生物 病理 内科学 心力衰竭 环境卫生
作者
Timothy F. Spracklen,Bernard Keavney,Nakita Laing,Ntobeko Ntusi,Gasnat Shaboodien
出处
期刊:Heart [BMJ]
卷期号:108 (23): 1843-1850 被引量:8
标识
DOI:10.1136/heartjnl-2021-320424
摘要

Over the past three decades numerous disease-causing genes have been linked to the pathogenesis of heritable cardiomyopathies, but many causal genes are yet to be identified. Next-generation sequencing (NGS) platforms have revolutionised clinical testing capacity in familial cardiomyopathy. In this review, we summarise how NGS technologies have advanced our understanding of genetic non-syndromic cardiomyopathy over the last decade. First, 26 putative new disease-causing genes have been identified to date, mostly from whole-exome sequencing, and some of which ( FLNC , MTO1 , HCN4 ) have had a considerable clinical impact and are now included in routine diagnostic gene panels. Second, we consider challenges in variant interpretation and the importance of large-scale NGS population control cohorts for this purpose. Third, an emerging role of common variation in some forms of genetic cardiomyopathy is being elucidated through recent studies which have illustrated an additive effect of numerous polymorphic loci on cardiac parameters; this may explain phenotypic variability and low rates of genetic diagnosis from sequencing studies. Finally, we discuss the clinical utility of genetic testing in cardiomyopathy in Western settings, where NGS panel testing of core disease genes is currently recommended with possible implications for patient management. Given the findings of recent studies, whole-exome or whole-genome sequencing should be considered in patients of non-European ancestry with clearly familial disease, or severe paediatric disease, when no result is obtained on panel sequencing. The clinical utility of polygenic risk assessment needs to be investigated further in patients with unexplained dilated cardiomyopathy and hypertrophic cardiomyopathy in whom a pathogenic variant is not identified.
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