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Construction, Identification and Analysis of the Interaction Network of African Swine Fever Virus MGF360-9L with Host Proteins

生物 小桶 病毒 非洲猪瘟病毒 病毒复制 病毒学 解旋酶 病毒蛋白 蛋白质-蛋白质相互作用 基因 病毒病机 计算生物学 细胞生物学 遗传学 基因表达 转录组 核糖核酸
作者
Bo Yang,Dajun Zhang,Xijuan Shi,Chaochao Shen,Hao Yu,Ting Zhang,Jinke Yang,Xingguo Yuan,Xuehui Chen,Dengshuai Zhao,Huimei Cui,Dan Li,Zixiang Zhu,Hong Tian,Fan Yang,Haixue Zheng,Keshan Zhang,Xiangtao Liu
出处
期刊:Viruses [Multidisciplinary Digital Publishing Institute]
卷期号:13 (9): 1804-1804 被引量:15
标识
DOI:10.3390/v13091804
摘要

African swine fever virus (ASFV) is prevalent in many countries and is a contagious and lethal virus that infects pigs, posing a threat to the global pig industry and public health. The interaction between the virus and the host is key to unlocking the mystery behind viral pathogenesis. A comprehensive understanding of the viral and host protein interaction may provide clues for developing new antiviral strategies. Here, we show a network of ASFV MGF360-9L protein interactions in porcine kidney (PK-15) cells. Overall, 268 proteins that interact with MGF360-9L are identified using immunoprecipitation and liquid chromatography–mass spectrometry (LC-MS). Accordingly, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted, and the protein–protein interaction (PPI) network was created. It was speculated that the cellular proteins interacting with MGF360-9L are involved in protein binding, metabolism, and the innate immune response. Proteasome subunit alpha type (PSMA3), 26S protease regulatory subunit 4 (PSMC1), autophagy and beclin 1 regulator 1 (AMBRA1), and DEAD-box helicase 20 (DDX20) could interact with MGF360-9L in vitro. PSMA3 and PSMC1 overexpression significantly promoted ASFV replication, and MGF360-9L maintained the transcriptional level of PSMA3 and PSMC1. Here, we show the interaction between ASFV MGF360-9L and cellular proteins and elucidate the virus–host interaction network, which effectively provides useful protein-related information that can enable further study of the potential mechanism and pathogenesis of ASFV infection.

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